DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42764 and Clec18a

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:176 Identity:38/176 - (21%)
Similarity:66/176 - (37%) Gaps:43/176 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLFFLAFRPCLGYNVIRSEAY-DAHNDHRRTWVVPELIESDELSHDAEEYA---IHLATLNIPDQ 64
            ||...|      :|.:||..: .|.|..|..|       |:.|:..||..|   :...|.|:...
Mouse   128 FLILTA------HNRLRSRVHPPAANMQRMDW-------SESLAQLAEARAALCVTSVTPNLAST 179

  Fly    65 ILYETAKDRNIRVDHLDYPLSEPENDFYTENICEFIRNECVYYWASEGAA-SYGIAKERRTKVEQ 128
            ..:.:....|:::    .|:..          ..|:  |.|..|.:||.. .:|.|:    ....
Mouse   180 PGHNSHVGWNVQL----MPMGS----------ASFV--EVVNLWFAEGLQYRHGDAE----CAHN 224

  Fly   129 SLADKFSAITWKSTTEMGVGWAP--KDRSKKGGRKILVVRYSPAGN 172
            :....::.:.|.:::::|.|..|  .|:.   ..:..|..|||.||
Mouse   225 ATCAHYTQLVWATSSQLGCGRQPCFVDQE---AMEAFVCAYSPGGN 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 30/156 (19%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 32/169 (19%)
EGF_Lam 315..360 CDD:214543
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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