DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42764 and Clec18a

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_038954171.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:166 Identity:37/166 - (22%)
Similarity:66/166 - (39%) Gaps:41/166 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YNVIRSEAY-DAHNDHRRTWVVPELIESDELSHDAEEYAIHLATLNIPDQILYETAKDR-----N 74
            :|.:||:.: .|.|..|..|       |:.|:..|:..|....|...|:  |..|.::.     |
  Rat    82 HNRLRSQVHPSAANMQRMDW-------SESLAQLAQARAALCGTSATPN--LAATLRNTPDVGWN 137

  Fly    75 IRVDHLDYPLSEPENDFYTENICEFIRNECVYYWASEGAA-SYGIAKERRTKVEQSLADKFSAIT 138
            :::    .|:..          ..|:  |.|..|.:||.. .:|.|:    ....:....::.:.
  Rat   138 VQL----LPMGS----------ASFV--EVVNVWFAEGLQYRHGSAE----CAHNATCAHYTQLV 182

  Fly   139 WKSTTEMGVGWAP--KDRSKKGGRKILVVRYSPAGN 172
            |.:::::|.||.|  .|:.   ..:..|..|||.||
  Rat   183 WATSSQLGCGWQPCFVDQV---ATEAFVCAYSPGGN 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 32/158 (20%)
Clec18aXP_038954171.1 CAP_euk 77..211 CDD:349399 32/160 (20%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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