DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42764 and scl-17

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:218 Identity:45/218 - (20%)
Similarity:74/218 - (33%) Gaps:64/218 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLFFLAFRPCLGYNVIR------SEAYDAHNDHRR-----TWVVPELIESDELSHDAEEYAI 54
            ::..||...|.|    |..:      .:..||||:.|.     |:|...|:.:...:....::.:
 Worm     3 IIFLLFGFIFHP----NNAQFDKSGVQQTLDAHNEFRSSIAKGTYVTKGLLHAPATNIMKMKWNV 63

  Fly    55 HLATLNIPDQILYETAKDRNIRVDHLDYPLSEPENDFYTENICEFIRNECVYYW-----ASEGAA 114
            .:||         ......|......|.||             |.:..||:  |     ||:|..
 Worm    64 TIAT---------AAQNHANKCPKGHDGPL-------------EGVSGECM--WSGHINASKGVN 104

  Fly   115 SYGIAKERRTKVEQS--------LADKF--------SAITWKSTTEMGVGWAPKDRSKKGGRK-- 161
            ..|....:....|.:        ::|:|        ..:||.|  ::.||...|...|:|..:  
 Worm   105 HLGAVAAKAWSSEYTKKGWETDVMSDEFFNSGVGHAIIMTWYS--QVNVGCGVKLCQKEGDYQLA 167

  Fly   162 ILVVRYSPAGNQPGEYAENIGDT 184
            |:|.:|...|...|:.....|.|
 Worm   168 IVVCKYWGEGQGNGKIMYESGPT 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 36/177 (20%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 35/174 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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