DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42764 and scl-24

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_507429.1 Gene:scl-24 / 184188 WormBaseID:WBGene00008575 Length:212 Species:Caenorhabditis elegans


Alignment Length:216 Identity:42/216 - (19%)
Similarity:81/216 - (37%) Gaps:61/216 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLFLFFLA----------FRPCLGYNVIRSEAYD----AHNDHRRTWVVPELIESDELSHDA-E 50
            |.|.:..||          |.|...:|   :||.|    .||..|           :..||.. |
 Worm     1 MKLIILLLALTAAAHAERHFNPQHQWN---AEAIDNIVFIHNKLR-----------NAASHGLWE 51

  Fly    51 EYAI----HLATLNIPDQILYETAKDRNI--RVDHLDYPLSEPENDF-YTENICEFIRNECVYYW 108
            .|:|    ::..|:..:.::.|...::..  ..|:.:.|:...:|.: |..|..:.|        
 Worm    52 RYSISKSSNMQLLSWNESLVAEVENEKYYCEPADNKNLPIKLGDNIYQYDVNTYDDI-------- 108

  Fly   109 ASEGAASYG-IAKERRTKV---EQSLADKFSAITWKSTTEMGVGWAPKDR-SKKG---GRKILVV 165
              :|..:.| |.|:....:   |::..::...:.:..:..:|..:...|: ..||   ..::::.
 Worm   109 --DGVGAMGSINKDTHNALKSEEKATKNRLRQMLYSKSKSIGCIYESCDKIDSKGINYNTRLVIC 171

  Fly   166 RYSPAGNQPGEYAENIGDTEF 186
            :|||.       .|||.:..|
 Worm   172 KYSPP-------LENIDEQLF 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 31/169 (18%)
scl-24NP_507429.1 CAP_euk 31..174 CDD:349399 26/163 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.