DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42764 and R3hdml

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001092801.1 Gene:R3hdml / 100043899 MGIID:3650937 Length:253 Species:Mus musculus


Alignment Length:191 Identity:38/191 - (19%)
Similarity:60/191 - (31%) Gaps:73/191 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SEAYDAHNDHRRTWVVPE------LIESDELSHDAEEYAIHLATLNIPDQILYETAKDRNIR--- 76
            |...|.|| |.|..|.|.      ::..::|:..||.:|......:.|.|::....::.:|.   
Mouse    64 SALLDYHN-HIRASVHPPAANMEYMVWDEQLARSAEAWATQCIWTHGPSQLMKYVGQNLSIHSGR 127

  Fly    77 ----VD----------HLDYP------------LSEPENDFYTENICEFIRNECVYYWASEGAAS 115
                ||          |..:|            .|.|....||:.:           |||  ::.
Mouse   128 FRSVVDLVRSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMV-----------WAS--SSR 179

  Fly   116 YGIAKERRTKVEQSLADKFSAITWKSTTEMGVGWAPKDRSKKGGRKILVVRYSPAGNQPGE 176
            .|.|....:.:.          .|.:|.:..|              .||..|:..||..||
Mouse   180 LGCAINTCSSIN----------VWGNTWQQAV--------------YLVCNYAIKGNWIGE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 33/184 (18%)
R3hdmlNP_001092801.1 CAP_R3HDML 63..208 CDD:349409 33/181 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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