DRSC/TRiP Functional Genomics Resources

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Protein Alignment B9d2 and mksr-1

DIOPT Version :10

Sequence 1:NP_001188704.1 Gene:B9d2 / 10178891 FlyBaseID:FBgn0261683 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_508203.1 Gene:mksr-1 / 186954 WormBaseID:WBGene00019364 Length:229 Species:Caenorhabditis elegans


Alignment Length:174 Identity:39/174 - (22%)
Similarity:70/174 - (40%) Gaps:7/174 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LKAVDFAEPHLYC-KWSLQSGNAWRLVQGEVQGQSHVASHRLQSSSDFAQPLDIHLSTASVQGWP 74
            ::..:|.|....| |.|..:...|:::.||....|..:.....:......|.:..|..:|...||
 Worm    15 VRTTEFPEESNVCVKLSTVATGDWKIINGETVSLSSFSFRGADNQIFIDLPFECGLKGSSPFMWP 79

  Fly    75 RLLVEVYAVNVLQQSWPVGYGFVHVPSTPGTHRLEIGTWKVAPNGLWQSLRERFGGGGAALSKTD 139
            ||::..::.:...:....|||.:.:|:.||.|...:..:...|:...|.|..:.....|......
 Worm    80 RLVLNCFSKDHSGKDCVTGYGMLPIPTEPGKHVCRVHCFLPEPSSTVQQLIAKLRRVNAEFVDPM 144

  Fly   140 LLYSGVERYKLQTLSSGKVIVELNLIFR------KFDEYGVEFK 177
            |..:...||..:|.:.|.|.:|:|:..:      ||.....|.|
 Worm   145 LPANADGRYACRTSTKGYVDLEINVSIKCSDTAYKFTSTSTEIK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B9d2NP_001188704.1 B9-C2 4..165 CDD:462108 35/154 (23%)
mksr-1NP_508203.1 B9-C2 9..169 CDD:462108 34/153 (22%)

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