DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42713 and col28a1a

DIOPT Version :10

Sequence 1:NP_001188736.1 Gene:CG42713 / 10178890 FlyBaseID:FBgn0261630 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_001334976.1 Gene:col28a1a / 555428 ZFINID:ZDB-GENE-070705-84 Length:1170 Species:Danio rerio


Alignment Length:72 Identity:25/72 - (34%)
Similarity:33/72 - (45%) Gaps:11/72 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PGRP----SHQNCLHGKDEGVERARHCNRDPNPQMWYYNQRENRCIKMRYLGCKGNRNRYCTLNE 83
            |..|    .|..|..|.|.|..|....       ||||:.:.|.|.:..|.||:||.||:.|.:.
Zfish  1105 PPHPDNSLKHVGCGQGLDPGPCREYSV-------MWYYDPQANACAQFWYGGCQGNSNRFETEDI 1162

  Fly    84 CQRKCVR 90
            |:..||:
Zfish  1163 CKSTCVQ 1169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42713NP_001188736.1 Kunitz-type 31..88 CDD:438633 20/56 (36%)
col28a1aNP_001334976.1 vWFA_subfamily_ECM 49..214 CDD:238727
gly_rich_SclB <246..>551 CDD:468478
gly_rich_SclB <482..>766 CDD:468478
VWA 802..980 CDD:459670
Kunitz_collagen_alpha1_XXVIII 1117..1167 CDD:438671 20/56 (36%)
Blue background indicates that the domain is not in the aligned region.

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