DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42713 and crispld1b

DIOPT Version :9

Sequence 1:NP_001188736.1 Gene:CG42713 / 10178890 FlyBaseID:FBgn0261630 Length:92 Species:Drosophila melanogaster
Sequence 2:XP_009296842.1 Gene:crispld1b / 393442 ZFINID:ZDB-GENE-040426-1204 Length:509 Species:Danio rerio


Alignment Length:85 Identity:22/85 - (25%)
Similarity:26/85 - (30%) Gaps:33/85 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PSHQNCLHGKDEGVERARHCNRDPNP----QMWY---------YNQRENRCIKMRYLGCKG---- 73
            |||.....|::.|.    |..||..|    |.||         |.|..|.....|   |.|    
Zfish   110 PSHLLTRIGQNLGA----HWGRDRPPTFHVQAWYDEVRDFSYPYPQECNPHCPYR---CSGPVCT 167

  Fly    74 --------NRNRY-CTLNEC 84
                    ..|:. |.:|.|
Zfish   168 HYTQLVWATSNKIGCAINVC 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42713NP_001188736.1 KU <54..89 CDD:294074 12/53 (23%)
crispld1bXP_009296842.1 SCP_euk 64..208 CDD:240180 22/85 (26%)
LCCL 301..385 CDD:128866
LCCL 404..501 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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