DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42713 and scl-18

DIOPT Version :9

Sequence 1:NP_001188736.1 Gene:CG42713 / 10178890 FlyBaseID:FBgn0261630 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:117 Identity:21/117 - (17%)
Similarity:37/117 - (31%) Gaps:53/117 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLLILASVV-LYVALSSAQSCPGRP---SHQNCL-------------HGK------------DEG 38
            |||:..::| |:..:.|..|..|:.   .|.|.:             |.|            :..
 Worm    15 FLLLFLTIVQLHKGVESIFSRKGQQDVLDHHNNIRSQLAFGNFVTKRHTKRAAGSNIKKFVWNAT 79

  Fly    39 VERARHCNRDPNPQ------------MWYYNQRENRCIKMRYLGCKGNRNRY 78
            :||:.:.....||.            .|:::.|            .|:.|:|
 Worm    80 LERSAYSFAQKNPSQHSFIPDIGENLFWHWSTR------------PGDFNKY 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42713NP_001188736.1 KU <54..89 CDD:294074 5/25 (20%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 14/95 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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