DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42713 and crispld2

DIOPT Version :9

Sequence 1:NP_001188736.1 Gene:CG42713 / 10178890 FlyBaseID:FBgn0261630 Length:92 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:95 Identity:22/95 - (23%)
Similarity:30/95 - (31%) Gaps:25/95 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALSSAQSCPGRPSHQNCLHGKDEGVERARHCNRDPNP----QMWYYNQRE------NRCIKMRYL 69
            |.|.|:.|......|:.|  ...|...|.|..|..:|    |.||...::      :.|......
Zfish    95 ATSWAEQCQWEHGPQDLL--MSIGQNLAVHWGRYRSPAYHVQAWYDEVKDYTYPYPHECNPWCPE 157

  Fly    70 GCKG------------NRNRY-CTLNECQR 86
            .|.|            ..||. |.::.|.|
Zfish   158 RCSGPMCTHYTQLVWATTNRVGCAVHVCPR 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42713NP_001188736.1 KU <54..89 CDD:294074 10/52 (19%)
crispld2XP_003199065.1 SCP_euk 61..206 CDD:240180 22/95 (23%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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