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Protein Alignment CG42713 and R3hdml
DIOPT Version :9
Sequence 1: | NP_001188736.1 |
Gene: | CG42713 / 10178890 |
FlyBaseID: | FBgn0261630 |
Length: | 92 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001092801.1 |
Gene: | R3hdml / 100043899 |
MGIID: | 3650937 |
Length: | 253 |
Species: | Mus musculus |
Alignment Length: | 63 |
Identity: | 15/63 - (23%) |
Similarity: | 19/63 - (30%) |
Gaps: | 32/63 - (50%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 YVALSSAQSCPGRPSHQNCLHGKDEGVERARHCNRDPNPQMWYYNQRENRCIKMRYLGCKGNR 75
|.|.....:|| ||:|. :|| .|.| :.|.|.||
Mouse 219 YKAGKPCSACP--PSYQG-------------NCN-------------SNMC----FSGLKSNR 249
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG42713 | NP_001188736.1 |
KU |
<54..89 |
CDD:294074 |
6/22 (27%) |
R3hdml | NP_001092801.1 |
CAP_R3HDML |
63..208 |
CDD:349409 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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