DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42853 and AT3G19460

DIOPT Version :10

Sequence 1:NP_001189128.1 Gene:CG42853 / 10178880 FlyBaseID:FBgn0262100 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001325444.1 Gene:AT3G19460 / 821480 AraportID:AT3G19460 Length:234 Species:Arabidopsis thaliana


Alignment Length:210 Identity:49/210 - (23%)
Similarity:86/210 - (40%) Gaps:51/210 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ATSANSVQVS-GAGAEVNEAKLICIWEGITELILWRNWIKSMLVFV-------MLQTIIYDLL-- 56
            ::|..||..| |||:             :.:|:||||...::::.:       :.:...|:||  
plant     7 SSSRVSVHQSLGAGS-------------VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSF 58

  Fly    57 -SEPLVFVVSV---WALIIMVISMGYRFLVQYTNTHIQNNSYPKYLDIDLR--ISQELSKQLGVL 115
             |..|:.:|::   ||....|::   |.|....|..|......|..| |||  |:..||....:.
plant    59 VSNVLLLLVAIFFLWAKSATVLN---RPLPPVPNMEIPEEFANKAAD-DLRVWINYVLSIASDIT 119

  Fly   116 VSTKVVAFLN-----------------NLREILLVKSFSKSFKWFGLLL-IISKLGKQINFLIVG 162
            ::...:..|.                 ::..:.:..||..:.|...|:| .||.:|..||.|.:.
plant   120 IARNPIRLLQVFFHHLWQTICCIFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLV 184

  Fly   163 QLGLFLLFTIPKMCE 177
            .:|:.|..:.|.:.|
plant   185 YIGVLLSLSFPIVYE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42853NP_001189128.1 Reticulon 31..179 CDD:460562 42/180 (23%)
AT3G19460NP_001325444.1 Reticulon 22..210 CDD:460562 42/182 (23%)

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