DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42853 and Rtn4

DIOPT Version :10

Sequence 1:NP_001189128.1 Gene:CG42853 / 10178880 FlyBaseID:FBgn0262100 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_918943.1 Gene:Rtn4 / 68585 MGIID:1915835 Length:1162 Species:Mus musculus


Alignment Length:460 Identity:84/460 - (18%)
Similarity:145/460 - (31%) Gaps:149/460 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   532 GAIPALLGLLKNGGPKSQESSANTLLKLIKTADPSVIEQ--VQALFLGDAPKSKTHLIRV----L 590
            |.:..|.|:..||.|.                 |.|:.|  |:....|..|...:..:||    :
Mouse    21 GGVNQLGGVFVNGRPL-----------------PDVVRQRIVELAHQGVRPCDISRQLRVSHGCV 68

  Fly   591 GHVLAS-----------ASLEEFVTKGSAANNGLRSLVQRLASSNEKMKENAASVLADLFSSRKD 644
            ..:|.|           .|::..|..||........:|:::|....:.....|..:.|...: :.
Mouse    69 SKILGSYQKDLIRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA-EG 132

  Fly   645 LCGGLGFDEDDNPCTKLL---------------SGNTHAVATQLAHALGSLSNPTKKKTATKKLS 694
            :|     |.|..|....:               |..|....:...|.:|.|.:.....|.:..||
Mouse   133 VC-----DNDTVPSVSSINRIIRTKVQQPFHPSSDGTGTPLSTAGHTIGDLESTPYTLTYSCALS 192

  Fly   695 GPEVEVIKPLIKSAKTNPIESTENPMSTLANLLSDPNVAAEALNDD---------------VVSA 744
            .|  ....|.:.||..:|:.|     .::..:|..|....|....|               .|.:
Mouse   193 VP--STASPPVSSASNDPVGS-----YSINGILGIPRSNGEKRKRDDDGSDGSGPNSDSQGSVES 250

  Fly   745 LTRVLREGTLQGKRNASHALHQLLKHFQVSDVFKGNEQCR------FAVSELIDLLNATDLNNSA 803
            |.:.||....  .:....||.::.:.....|||..:|..:      :::..|          |..
Mouse   251 LRKHLRADAF--TQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPAL----------NPG 303

  Fly   804 FIDVLEVLSLLAKAKYGANLSHN------------------------PFSAFGEVPSNLDSLVRG 844
            ..:|...||....:..|:::|.:                        ||:     ||:|  .|.|
Mouse   304 LDEVKPSLSTSVSSDLGSSVSQSYPVVTESHSSSMCVKQEPHEASLAPFT-----PSSL--AVSG 361

  Fly   845 LAEGHPLVQDKAIEILS-----------RFCK--TQFILLGRLLVTQSKSISSLANRTINSSSPE 896
            |||..||....:::..:           .:|:  :|.|:.||          .:|:.|:....|.
Mouse   362 LAELLPLQPSVSVDASTPCYGAYAHHAPSYCQYTSQHIIAGR----------EMASTTLPGYPPH 416

  Fly   897 IKVGG 901
            :...|
Mouse   417 VPPTG 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42853NP_001189128.1 Reticulon 31..179 CDD:460562
Rtn4NP_918943.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..183 33/184 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..432 3/14 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 711..730
Reticulon 975..1139 CDD:460562
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.