DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42818 and CACNA2D4

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:NP_758952.4 Gene:CACNA2D4 / 93589 HGNCID:20202 Length:1137 Species:Homo sapiens


Alignment Length:580 Identity:107/580 - (18%)
Similarity:196/580 - (33%) Gaps:174/580 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   609 HDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNN-IKSTSQLTTESTFNSSINITNSTTVASSTF 672
            |:|.:.:..|...|:         |:...::|.| ::..::...||..:.| |:..:|:::|...
Human   155 HEFNESLVFDYYNSV---------LINERDEKGNFVELGAEFLLESNAHFS-NLPVNTSISSVQL 209

  Fly   673 ST---TESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYP 734
            .|   .:...|.:..|:|.....||    |||.     ....|:|..     |..|.|.....||
Human   210 PTNVYNKDPDILNGVYMSEALNAVF----VENF-----QRDPTLTWQ-----YFGSATGFFRIYP 260

  Fly   735 NLSTTESSP---TFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPM 796
            .:..|....   |||.    .|.....::..|.|| |..:|::...::.::.|:|   |..::.:
Human   261 GIKWTPDENGVITFDC----RNRGWYIQAATSPKD-IVILVDVSGSMKGLRMTIA---KHTITTI 317

  Fly   797 LISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKL---------------- 845
            |.:..:.....|:|.| |.|:......:.:|......|.:...|.:|:|                
Human   318 LDTLGENDFINIIAYN-DYVHYIEPCFKGILVQADRDNREHFKLLVEELMVKGVGVVDQALREAF 381

  Fly   846 --LKLF---------------------DDFE-------------RMYNVLL--DDSIQSTTQSTT 872
              ||.|                     :|:|             |::..|:  :.|.....:...
Human   382 QILKQFQEAKQGSLCNQAIMLISDGAVEDYEPVFEKYNWPDCKVRVFTYLIGREVSFADRMKWIA 446

  Fly   873 QNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSH--------------SSTPSSINN 923
            .||..:.|..||:..|.:::     .:|....|.|......|              ||...|:..
Human   447 CNNKGYYTQISTLADTQENV-----MEYLHVLSRPMVINHDHDIIWTEAYMDSKLLSSQAQSLTL 506

  Fly   924 L---------RSDESNNHQPIVDAI-------QQLKMALYHDF----YAFKKSQEERMEKILQLL 968
            |         :.:|:.:|..::..:       :.:|:|..:..    |||           |...
Human   507 LTTVAMPVFSKKNETRSHGILLGVVGSDVALRELMKLAPRYKLGVHGYAF-----------LNTN 560

  Fly   969 NG--------KPIDRRTKTIAKPRTIRKKVSREIQKRNSDVK-EDKIHHYKADKFIKNPKNGNQD 1024
            ||        :|:.|..|.: ||:.....|..      |:|: ||:....:....  |.:.|...
Human   561 NGYILSHPDLRPLYREGKKL-KPKPNYNSVDL------SEVEWEDQAESLRTAMI--NRETGTLS 616

  Fly  1025 SHIPKPILNSAR----------SKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEI 1074
            ..:..|:....|          :.|.|.|..|..:...|..:::.....:.||  .:|::
Human   617 MDVKVPMDKGKRVLFLTNDYFFTDISDTPFSLGVVLSRGHGEYILLGNTSVEE--GLHDL 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 28/127 (22%)
CACNA2D4NP_758952.4 VWA_N 148..264 CDD:285584 29/132 (22%)
vWA_VGCC_like 277..460 CDD:238740 33/187 (18%)
MIDAS-like motif 297..301 0/3 (0%)
Cache_1 487..579 CDD:280839 16/102 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.