DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42818 and cachd1

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:XP_001334829.3 Gene:cachd1 / 794807 ZFINID:ZDB-GENE-100819-3 Length:1290 Species:Danio rerio


Alignment Length:943 Identity:174/943 - (18%)
Similarity:301/943 - (31%) Gaps:354/943 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YDKTFHTEIHANNETDSQELENIILEK----------------------------NLQD------ 105
            ::...:||..:|.||:.|:|...|.||                            .:||      
Zfish    82 FNSFVYTEKTSNGETEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCSIPP 146

  Fly   106 SKTEFQEN-RASQPKNMHSFQIPEAIESH-FN-----NKELQNENDLHKGLKQQYRSGSE----- 158
            |..||..| .|:..|.:...::...:.|. ||     |..|.:....:.|:|.||.|..|     
Zfish   147 SMMEFDGNFNANVSKTVSCDRLSPTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTL 211

  Fly   159 ------------QDKSGPENVREI--ASKLILQWAENQRSLLDSFVKAITD-------------- 195
                        :.:|.|..|..:  .||.|:...::..|:.::.::...|              
Zfish   212 FPAHKFHCKGTFEHRSRPVYVAAVRPQSKHIVVIIDHGASVTETQLQIARDAALVILNSIDEHDK 276

  Fly   196 --VLKVHDSKLNMKIN------ISP------RDIMILKDMLK----------------QLLESIM 230
              ||.:.|:..:..::      :||      |.:......:|                |||.:..
Zfish   277 ISVLTIADTVRSCSLDQCYKSFLSPATSETKRKMSTFISNIKASDSSTQHAVGFQKAFQLLRNTS 341

  Fly   231 QLREGSTSTRARIV-LNKWIETQKSLIDSFS-------QAIQNTNQNVDNIANV--YEVMENLNK 285
            .:....|:|...|: |:..|.::    ||..       .|::..|::::|...:  |.:|.:...
Zfish   342 NVTRQLTNTDMMIIYLSSGITSR----DSSEHEKRATLSAVKEENRHLNNSVMILTYALMNDGVT 402

  Fly   286 NLRELVIL------------LSDKESFPTTESS-------SSQQTTSIYATTTFYLT-------S 324
            .|:||..|            :.|:.:.|..:.|       |:.:||    ...||:.       .
Zfish   403 GLKELAFLRDLAEQNSLKYGVQDRSALPVVKGSMMVLNQLSNLETT----VGRFYINLPNRMIDV 463

  Fly   325 STFGSTHPIVDE-------NINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPST 382
            :||  :.|..|:       .::|....|||:.|:..:.|.:          :|...:.||.|.|.
Zfish   464 ATF--SLPYADQMGDGFIMTVSRPCYFGNLLLGVVGVDVNL----------AYILEDVTYYQDSL 516

  Fly   383 STYL----NAEVTTSHPT-TSTYEVTN--IITDESKIKDM--FNLIKGIEDLISQYNGKHKFT-- 436
            ::|.    |...|..||: |..|.:|.  :.||....:::  |.:::  ::::|...|.....  
Zfish   517 ASYTFLIDNKGYTLMHPSLTRPYLMTEAPLHTDIIHYENIPGFPVVR--QNILSLPLGSQVIAVP 579

  Fly   437 STTSLTGKSNS-REPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVF 500
            ..:||:...|. |:|....|:     .|:::....                    .||.....|:
Zfish   580 VNSSLSWHMNRLRDPNRDAYN-----VSYAWKLVQ--------------------DTSFILCIVY 619

  Fly   501 DQDSHKFKVMKNL-----IKELKGLIE---------HFSDTKNITSTT--YSTGDSKS-----FQ 544
            .|.....|.:|||     .|.|...::         ||.....:.|.|  .|.|...|     .|
Zfish   620 VQPEIPVKQLKNLNTAPSSKLLYHRLDLLGQPSSCLHFKQLATVESPTVMLSAGSFSSPYEHLSQ 684

  Fly   545 P---------TATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTS----SQLNTTLSI 596
            |         ||...|:|     :.|..|...:|..| :...|:|::.|..|    |.||..:..
Zfish   685 PETKRMVEHYTAYLSDNT-----RLIANPGLKSSVRN-EVMATSHVTDEWMSLMEMSSLNCYIVR 743

  Fly   597 TGTTTPN-------------------------------LTTSTHDFKD------------QINDD 618
            ....|||                               |.|.|..:.|            .|:..
Zfish   744 RYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLITFTGPYLDVGGAGYVVTISHTIHAP 808

  Fly   619 DSK--------------SLKHLIKILSDLVYSLN-DKNN------IKSTSQLTTESTFNSSINIT 662
            .|:              :|::..|:|.||:...| ||.|      ::....|           :.
Zfish   809 SSQMASGYTVAVMGIDFTLRYFYKVLLDLLPICNQDKGNKIRCFIMEDRGYL-----------VA 862

  Fly   663 NSTTVASSTFSTTESMAI-HSTPYLSTREITVFQFNDVEN-----------------------IN 703
            :.|.:.....:..|...| |..|.::         ||:.|                       .|
Zfish   863 HPTLIDPKGHAPAEQQHITHKEPLVA---------NDILNHPNFVKKNLCNSFSDRTVQRFYKFN 918

  Fly   704 PIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNL 736
            ..|..:.|.:....|.|.|..:....|.::..:
Zfish   919 TSIVGDLTNLVHGSHCSKYRLTRIPGTNAFAGI 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 17/125 (14%)
cachd1XP_001334829.3 VWA_N 102..217 CDD:285584 22/114 (19%)
vWFA 226..>355 CDD:294047 20/128 (16%)
Cache_1 469..536 CDD:280839 18/76 (24%)
Cache_1 785..866 CDD:280839 14/91 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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