DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42818 and Cacna2d2

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:XP_017168985.1 Gene:Cacna2d2 / 56808 MGIID:1929813 Length:1160 Species:Mus musculus


Alignment Length:877 Identity:148/877 - (16%)
Similarity:277/877 - (31%) Gaps:233/877 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 LNKWIETQKSLIDSFSQ---AIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESS 306
            :..|....:..||...:   .:|...:...:..|::||.||..:.|.|.|  ..|.||....:..
Mouse    73 MQHWARRLEQEIDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKV--AGDIESLLDRKVQ 135

  Fly   307 SSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYT 371
            :.::...         .:..|...|...| ||...:||....|....:.....|..:..|.||..
Mouse   136 ALKRLAD---------AAENFQKAHRWQD-NIKEEDIMYYDAKADAELDDPESEDMERGSKTSAL 190

  Fly   372 TTESTYIQ-PSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKF 435
            ..:  :|: |:....:|...|.....|..|:.:.:|.:|      .|..:.:|::..:       
Mouse   191 RLD--FIEDPNFKNKVNYSYTAVQIPTDIYKGSTVILNE------LNWTEALENVFIE------- 240

  Fly   436 TSTTSLTGKSNSREPTM--TTYSSAGGITSHSFTT--TSPK-----TVTTSSSHSTTESSPSHPT 491
                     :..::||:  ..:.||.|:|.:...|  .:||     .|.....:....|||..  
Mouse   241 ---------NRRQDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKD-- 294

  Fly   492 TSNYEVTVFDQDSH----KFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDS 552
                .|.:.|....    ..|:||..:.|   :::..||...:...::    ::..||.:.....
Mouse   295 ----MVIIVDVSGSVSGLTLKLMKTSVCE---MLDTLSDDDYVNVASF----NEKAQPVSCFTHL 348

  Fly   553 TDRSSSQPITFPES-----TTSTTNLQS-------TITNHLSTESTSSQLNTTLSITGT------ 599
            ...:......|.|:     ...||..::       .:.|...|.:..:::....:..|.      
Mouse   349 VQANVRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDV 413

  Fly   600 ----TTPNLTTSTHDFKDQINDDDSKSLK--------HLIKILSDLVYSLNDKNNI--------- 643
                ..||.|.....|....::.|...|:        :..:|.|.....:|.:..:         
Mouse   414 FEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMACTNKGYYFEIPSIGAIRINTQEYLDVLGRPMVL 478

  Fly   644 --KSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTP-------YLSTREITVFQFNDV 699
              |...|:...:.:..::.:....|.....|:.|:     ..|       .|....|.| ..||:
Mouse   479 AGKDAKQVQWTNVYEDALGLGLVVTGTLPVFNLTQ-----DGPGEKKNQLILGVMGIDV-ALNDI 537

  Fly   700 ENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPT----------FDSTISHSNT 754
            :.:.|       ..|...:...:..........:|||....|..|          .|:.:...|.
Mouse   538 KRLTP-------NYTLGANGYVFAIDLNGYVLLHPNLKPQVSQTTNFREPVTLDFLDAELEDENK 595

  Fly   755 SSQTRSLGSYKDKIKNIVELLKKL--RKIQKTL----------ADKSKGQLSPML---------- 797
            ....||:.......|.|..|:|.|  |.|.:.:          .:.|.|.:.|..          
Mouse   596 EEIRRSMIDGDKGHKQIRTLVKSLDERYIDEVIRNYTWVPIRSTNYSLGLVLPPYSTYYLQANLS 660

  Fly   798 --ISRIKAVLKQIVAGNIDSVNGDSTELEILLSTT--------VNPNEDTTDLT----------- 841
              |.::|..:.::            .:.|.||.::        :.|.|...||.           
Mouse   661 DQILQVKLPISKL------------KDFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKN 713

  Fly   842 -MEKLLKLFDDFER-----MYNVLLDDSI-QSTTQSTTQNNTIFSTTYS--TIFSTTQSISTTSP 897
             :|.:.|:..|.::     ::|::||..| |...:...::..:  .|||  .:|:.|..      
Mouse   714 FIELMEKVTPDSKQCNNFLLHNLILDTGITQQLVERVWRDQDL--NTYSLLAVFAATDG------ 770

  Fly   898 TQYALTSSTPNTSTTSHSSTPSSIN-NLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERM 961
               .:|...||.:....:..|...| :......:||.                 |.||...::.:
Mouse   771 ---GITRVFPNKAAEDWTENPEPFNASFYRRSLDNHG-----------------YIFKPPHQDSL 815

  Fly   962 EKILQLLN---GKPIDRRTKTIAKPRTIRKKV 990
            .:.|:|.|   |..:....:.....||:|..|
Mouse   816 LRPLELENDTVGVLVSTAVELSLGRRTLRPAV 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 22/148 (15%)
Cacna2d2XP_017168985.1 VWA_N 144..268 CDD:369855 29/148 (20%)
vWA_VGCC_like 280..459 CDD:238740 28/191 (15%)
HK_sensor 536..648 CDD:365792 21/118 (18%)
VGCC_alpha2 675..1120 CDD:369894 38/201 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.