DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42818 and stj

DIOPT Version :10

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster


Alignment Length:876 Identity:150/876 - (17%)
Similarity:270/876 - (30%) Gaps:294/876 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 FLQEFPTQSSKGDLDDLKYPTQLEGRH----DSPK----------------YD----------KT 78
            |:::||....:.|:....|..:|...:    .|||                .|          .|
  Fly   232 FMRQFPASKWRKDVPVDLYDCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDT 296

  Fly    79 FHTEIHANNETDSQEL-------ENIILEKNLQDSKTEFQEN-RASQPKNMHSFQIPEAIESHFN 135
            ..|....|..|..:|:       |:.:::.||.:.: |.:|. ...:||::.::  ..|:...| 
  Fly   297 LGTNDFVNIFTFDKEVSPVVPCFEDTLIQANLGNIR-ELKEGIELFRPKSIANY--TAALTKAF- 357

  Fly   136 NKELQNENDLHKGLKQQYRSGSEQDKSGPENVREI--------------------ASKLILQW-- 178
              ||..|..|.....|..::........|||.||:                    ..|.:..|  
  Fly   358 --ELLEETKLSSRGAQCNQAIMIIGDGAPENNREVFELHNWRDPPYKPVRVFTYLIGKEVANWDD 420

  Fly   179 -----AENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMI--------------------L 218
                 .|||     .:...::|..:|.:..||. |.:..|.:::                    |
  Fly   421 IRWMACENQ-----GYYVHLSDTAEVREMVLNY-IPVMARPLVLGRHDHPVIWSQVYADIEDTKL 479

  Fly   219 KDMLKQLLESIMQLREGSTSTRARIVLNKW------IETQKSLIDSFSQAIQNTNQNVDNIANVY 277
            .|.|..:.:...|..:         ||..|      :|..:.....:.:..:..||.||  :|||
  Fly   480 SDYLWDINQCEYQKAD---------VLEYWQVHDRMLEPSEMHRRKYRRMKETWNQPVD--SNVY 533

  Fly   278 EVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVN 342
            :.|..::..:            :...|::....||.|                :|....|: :|.
  Fly   534 QFMTTVSMPI------------YDRRENALINLTTDI----------------NPAAKINL-QVT 569

  Fly   343 IMGNLIKGLRNIMVQMDETNKTSS-------STSYTTTESTYI------QPSTSTYLNAEVTTSH 394
            .:.|:: |:....|.::|..|..|       ..::..|.:.|:      :|....|:   :..::
  Fly   570 RIANIL-GVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFRPIFQGYI---LKPAY 630

  Fly   395 PTTSTYEVTNIITDESKIKDMFNLIKGIED-LISQYNG------KHKFTSTTSLTGKSNSREPTM 452
            .:....|| .::.|:...:|...::..|.| :|:|..|      |:.|...     |..:|    
  Fly   631 NSVDMIEV-ELLDDDRPARDFNPVLMTIRDSIINQSTGSKWMLVKNHFDEM-----KRVAR---- 685

  Fly   453 TTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIK-- 515
                    :....:.|...||..|     ...|.|.....|:.::.. ||:.|:..:....::  
  Fly   686 --------VKRQYYWTAIKKTPFT-----LVISYPEQYGVSHMDIRA-DQEIHRISIKGTNLRSV 736

  Fly   516 ---------------------------ELKGLIEHFSD------------TKNITSTTYSTGDSK 541
                                       ||...:|..|:            .....:..:|...|.
  Fly   737 FSGKRWKIHPDWLFCKHSNRTFKTPEIELLYFLERMSEPGWRWPGSRSAMPPEHAAAMFSNNSST 801

  Fly   542 SFQPTATTPDS--TDRSSSQPITFPESTT----STTNLQSTITNHLSTESTSSQL------NTTL 594
            ...|:....:|  .||...|.:.|....|    :.|:..|......|..|..:.|      |...
  Fly   802 GRYPSINEKESYYCDRQLMQALVFDARVTGWFSNNTSFNSKDDKGTSASSPIAVLMGLLPRNEFK 866

  Fly   595 SITGTTTPNLTTST-----HDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQL----- 649
            ...|.|...|.|.:     |:|.....::..             |.....:||.::..::     
  Fly   867 QRFGVTVAFLATHSGLTRWHEFHSNAAEESG-------------VGETFSQNNTRAIDEIWYKRA 918

  Fly   650 -----TTESTF-----------NSSINITNSTTVASSTFSTTESMAI------HSTPYLSTREIT 692
                 ..|.:|           ||.|.:|.|..|..:....|...|:      ||..|.....||
  Fly   919 VDQHFVREESFVYSVPFDAGESNSEILVTASHAVFHNEGGKTAPAAVVGFQFQHSALYKLFHNIT 983

  Fly   693 --VFQFNDVENINPIISNNS-TTVTTNIHSS 720
              ....:|.:..  |:.||. ..::|.:|.:
  Fly   984 GNACAVDDKDCY--ILDNNGYVIISTRVHET 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 None
stjNP_001246303.1 VWA_N 107..241 CDD:462464 3/8 (38%)
vWA_VGCC_like 253..439 CDD:238740 35/196 (18%)
dCache_1 <528..624 CDD:460673 22/127 (17%)
PDC2_MCP_like 586..708 CDD:350337 25/147 (17%)
VGCC_alpha2 870..>1084 CDD:462488 30/158 (19%)

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