DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42818 and Cachd1

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:NP_001178687.1 Gene:Cachd1 / 298267 RGDID:1310770 Length:1288 Species:Rattus norvegicus


Alignment Length:907 Identity:166/907 - (18%)
Similarity:289/907 - (31%) Gaps:310/907 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YDKTFHTEIHANNETDSQELENIILEK----------------------------NLQD------ 105
            ::...:||..:|.|::.|:|...|.||                            .:||      
  Rat    83 FNSLVYTEKISNGESEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPP 147

  Fly   106 SKTEFQEN-RASQPKNMHSFQIPEAIESH-FN-----NKELQNENDLHKGLKQQYRS-------- 155
            |..||..| ..:..:.:...::...:.|. ||     |..|.:....:.|:|.||.|        
  Rat   148 SMMEFDGNFNTNVSRTVSCDRLSTTVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTV 212

  Fly   156 ---------GSEQDKSGPENVREI--ASKLILQWAENQRSLLDSFVKAITDVLKV-------HDS 202
                     ||.:.:|.|..|..:  .||.|:...::..|:.|:.::...|..:|       || 
  Rat   213 FPAHKFRCKGSYEHRSRPIYVSTVRPQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHD- 276

  Fly   203 KLNM----------------KINISP------RDIMILKDMLKQ----------LLESIMQLREG 235
            |:::                |..:||      |.:......:|.          ...:...:|..
  Rat   277 KISVLTVADTVRTCSLDQCYKTYLSPATSETKRKMSTFVSSVKPSDSPTQHAVGFHRAFQLIRST 341

  Fly   236 STSTRAR-------IVLNKWIETQKSLIDSFSQAIQNTNQNVDNIAN-----VYEVMENLNKNLR 288
            |.:||.:       |.|:..|.::.|..:.....::..|:....:.|     .|.:|.:....|:
  Rat   342 SNNTRFQANTDMVIIYLSAGITSKDSSEEDKKATLRVINEENGFLNNSVMILTYALMNDGVTGLK 406

  Fly   289 ELVIL------------LSDKESFPTTESS-------SSQQTTSIYATTTFY-------LTSSTF 327
            ||..|            :.|:.:.|..:.|       |:.:||    ...||       :..:.|
  Rat   407 ELAFLRDLAEQNSGKYGIPDRTALPVIKGSMMVLNQLSNLETT----VGRFYTNLPNRMIDEAVF 467

  Fly   328 GSTHPIVDE-------NINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTY 385
              :.|..||       .:::....|||:.|:..:.|.:          :|...:.||.|.|.::|
  Rat   468 --SLPFSDEMGDGLIMTVSKPCYFGNLLLGIVGVDVNL----------AYILEDVTYYQDSLASY 520

  Fly   386 L----NAEVTTSHPT-TSTYEV------TNIITDESKIKDMFNLIKGIEDLISQYNGKHKFT--S 437
            .    :...|..||: |..|.:      |:||..|:..|  |.|::  ::::|...|....|  .
  Rat   521 TFLIDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPK--FELVR--QNILSLPLGSQIITVPV 581

  Fly   438 TTSLTGKSNS-REPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFD 501
            .:||:...|. ||.....|:     .|:::....                    .||.....|..
  Rat   582 NSSLSWHINKLRETGKEAYN-----VSYAWKMVQ--------------------DTSFILCIVVI 621

  Fly   502 QDSHKFKVMKNL--IKELKGLIE------------HFSDTKNITSTT--YSTGDSKS-----FQP 545
            |.....|.:|||  :...|.|..            ||.....:.|.|  .|.|...|     .||
  Rat   622 QPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPSACLHFKQLATLESPTVMLSAGSFSSPYEHLSQP 686

  Fly   546 ---------TATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTT 601
                     ||...|:|...::..:.|  |..:.....|.:|:...|:...|.|||.:......|
  Rat   687 ETKRMVEHYTAYLSDNTRLIANPGLKF--SVRNEVMATSHVTDEWMTQMEMSSLNTYIVRRYIAT 749

  Fly   602 PN--------------------------------------------------LTTSTHDFKDQIN 616
            ||                                                  ::.:.|....|::
  Rat   750 PNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVGGAGYVVTISHTIHSSSTQLS 814

  Fly   617 DDDSK-------SLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFST 674
            ...:.       :|::..|:|.||:...|.....|....:..:..:    .:.:.|.|.....:.
  Rat   815 SGHTVAVMGIDFTLRYFYKVLMDLLPVCNQDGGNKIRCFIMEDRGY----LVAHPTLVDPKGHAP 875

  Fly   675 TESMAI-HSTPYLSTREITVFQFNDVENINPIISN---NSTTVTTNIHSSTYTTSTTDNTTS 732
            .|...| |..|.::         ||:.|....:..   ||.:..|...|..:.||...:.|:
  Rat   876 LEQQHITHKEPLVA---------NDILNHPNFVKKNLCNSFSDRTVQRSYKFNTSLVGDLTN 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 17/95 (18%)
Cachd1NP_001178687.1 VWA_N 103..218 CDD:400621 19/114 (17%)
vWFA 227..422 CDD:412136 34/195 (17%)
HK_sensor <463..503 CDD:365792 9/41 (22%)
dCache_1 688..881 CDD:397043 28/198 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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