DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42818 and Cacna2d3

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:NP_033915.1 Gene:Cacna2d3 / 12294 MGIID:1338890 Length:1091 Species:Mus musculus


Alignment Length:615 Identity:111/615 - (18%)
Similarity:191/615 - (31%) Gaps:179/615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 LIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESK 411
            |:|.|..||.:|......:........|..:::......|.            ||..|.:....:
Mouse    87 LVKKLAKIMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQ------------YEYFNAVLINER 139

  Fly   412 IKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTT 476
            .||...|..|.|.:::..:..:......||   |:.:.|| ..|:....|.:..:.:.|...|..
Mouse   140 DKDGNFLELGKEFILAPNDHFNNLPVNISL---SDVQVPT-NMYNKDPAIVNGVYWSESLNKVFV 200

  Fly   477 SSSHSTTESSPSHPTTSNYEVTVFDQDS----HKFKVMKNLIKELKGLIEHFSDTKNITSTTYST 537
            .:                     ||:|.    ..|...|...::..| |:...|...:.:  :..
Mouse   201 DN---------------------FDRDPSLIWQYFGSAKGFFRQYPG-IKWEPDENGVIA--FDC 241

  Fly   538 GDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLS------- 595
            .:.|.:...||:|...       :...:.:.|...|:.||     .:.|.|.:..||.       
Mouse   242 RNRKWYIQAATSPKDV-------VILVDVSGSMKGLRLTI-----AKQTVSSILDTLGDDDFFNI 294

  Fly   596 -------------ITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTS 647
                         :.||......|:...|::.::       |...|.:..|..:||:..||.|..
Mouse   295 ITYNEELHYVEPCLNGTLVQADRTNKEHFREHLD-------KLFAKGIGMLDIALNEAFNILSDF 352

  Fly   648 QLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTP--------YLSTREITVFQ--------- 695
            ..|.:.:..|.. |...|..|..|:.|.  .|.::.|        ||..||.....         
Mouse   353 NHTGQGSICSQA-IMLITDGAVDTYDTI--FAKYNWPDRKVRIFTYLIGREAAFADNLKWMACAN 414

  Fly   696 ---FNDVENINPIISN--------NSTTVTTNIHSSTYTTSTTDNTTSYPN---------LSTTE 740
               |..:..:..:..|        :...|....|...:|.:..|:|.....         |.||.
Mouse   415 KGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLADDQGLVLMTTV 479

  Fly   741 SSPTFDSTISHSNTSSQTRSLGSYKDKIKN---IVELLKKLRKIQ-------------------- 782
            :.|.|       :..::|||.|.....:..   :.||||.:.|.:                    
Mouse   480 AMPVF-------SKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHP 537

  Fly   783 --KTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELE----ILLSTTVNPNEDTTDLT 841
              :.|.::.|.:..|                |..||:....|.|    :|.:..|  |..|...:
Mouse   538 ELRPLYEEGKKRRKP----------------NYSSVDLSEVEWEDRDDVLRNAMV--NRKTGKFS 584

  Fly   842 MEKLLKLFDDFERMYNVLLDDSIQSTTQST 871
            || :.|..|..:|:. |:.:|...:..:.|
Mouse   585 ME-VKKTVDKGKRVL-VMTNDYYYTDIKGT 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 31/157 (20%)
Cacna2d3NP_033915.1 VWA_N 113..229 CDD:285584 26/153 (17%)
vWA_VGCC_like 242..425 CDD:238740 38/204 (19%)
MIDAS-like motif 262..266 0/3 (0%)
Cache_1 452..548 CDD:280839 18/102 (18%)
VGCC_alpha2 561..633 CDD:285647 14/56 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.