DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42818 and Cacna2d3

DIOPT Version :10

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:NP_033915.1 Gene:Cacna2d3 / 12294 MGIID:1338890 Length:1091 Species:Mus musculus


Alignment Length:615 Identity:111/615 - (18%)
Similarity:191/615 - (31%) Gaps:179/615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 LIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESK 411
            |:|.|..||.:|......:........|..:::......|.            ||..|.:....:
Mouse    87 LVKKLAKIMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQ------------YEYFNAVLINER 139

  Fly   412 IKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTT 476
            .||...|..|.|.:::..:..:......||   |:.:.|| ..|:....|.:..:.:.|...|..
Mouse   140 DKDGNFLELGKEFILAPNDHFNNLPVNISL---SDVQVPT-NMYNKDPAIVNGVYWSESLNKVFV 200

  Fly   477 SSSHSTTESSPSHPTTSNYEVTVFDQDS----HKFKVMKNLIKELKGLIEHFSDTKNITSTTYST 537
            .:                     ||:|.    ..|...|...::..| |:...|...:.:  :..
Mouse   201 DN---------------------FDRDPSLIWQYFGSAKGFFRQYPG-IKWEPDENGVIA--FDC 241

  Fly   538 GDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLS------- 595
            .:.|.:...||:|...       :...:.:.|...|:.||     .:.|.|.:..||.       
Mouse   242 RNRKWYIQAATSPKDV-------VILVDVSGSMKGLRLTI-----AKQTVSSILDTLGDDDFFNI 294

  Fly   596 -------------ITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTS 647
                         :.||......|:...|::.::       |...|.:..|..:||:..||.|..
Mouse   295 ITYNEELHYVEPCLNGTLVQADRTNKEHFREHLD-------KLFAKGIGMLDIALNEAFNILSDF 352

  Fly   648 QLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTP--------YLSTREITVFQ--------- 695
            ..|.:.:..|.. |...|..|..|:.|.  .|.::.|        ||..||.....         
Mouse   353 NHTGQGSICSQA-IMLITDGAVDTYDTI--FAKYNWPDRKVRIFTYLIGREAAFADNLKWMACAN 414

  Fly   696 ---FNDVENINPIISN--------NSTTVTTNIHSSTYTTSTTDNTTSYPN---------LSTTE 740
               |..:..:..:..|        :...|....|...:|.:..|:|.....         |.||.
Mouse   415 KGFFTQISTLADVQENVMEYLHVLSRPKVIDQEHDVVWTEAYIDSTLPQAQKLADDQGLVLMTTV 479

  Fly   741 SSPTFDSTISHSNTSSQTRSLGSYKDKIKN---IVELLKKLRKIQ-------------------- 782
            :.|.|       :..::|||.|.....:..   :.||||.:.|.:                    
Mouse   480 AMPVF-------SKQNETRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHP 537

  Fly   783 --KTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELE----ILLSTTVNPNEDTTDLT 841
              :.|.::.|.:..|                |..||:....|.|    :|.:..|  |..|...:
Mouse   538 ELRPLYEEGKKRRKP----------------NYSSVDLSEVEWEDRDDVLRNAMV--NRKTGKFS 584

  Fly   842 MEKLLKLFDDFERMYNVLLDDSIQSTTQST 871
            || :.|..|..:|:. |:.:|...:..:.|
Mouse   585 ME-VKKTVDKGKRVL-VMTNDYYYTDIKGT 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 None
Cacna2d3NP_033915.1 VWA_N 113..229 CDD:462464 26/153 (17%)
vWA_VGCC_like 242..425 CDD:238740 38/204 (19%)
MIDAS-like motif 262..266 0/3 (0%)
dCache_1 <439..569 CDD:460673 27/152 (18%)
PDC2_MCP_like 508..622 CDD:350337 25/125 (20%)
VGCC_alpha2 655..1068 CDD:462488
Blue background indicates that the domain is not in the aligned region.

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