DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42818 and cacna2d2

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:XP_012817109.1 Gene:cacna2d2 / 100038148 XenbaseID:XB-GENE-854937 Length:1116 Species:Xenopus tropicalis


Alignment Length:921 Identity:154/921 - (16%)
Similarity:265/921 - (28%) Gaps:371/921 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 NISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNT------- 266
            :|:||.::   ..|..||.:::.|    |.|..               |||.|  |:|       
 Frog     6 SIAPRTVL---PALCLLLPALLLL----TGTDG---------------DSFPQ--QHTMQFWAKR 46

  Fly   267 -NQNVDNI-----------------ANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTS 313
             .|..|.:                 .|::||.||:.:.|.|.|  ..|.||.         ....
 Frog    47 LEQEFDRVMRIFGGSQQLRGLYNDKRNLFEVKENVPRKLVEKV--AGDIESL---------LAKK 100

  Fly   314 IYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSY-------- 370
            :.|.......:..|...|...| ||...:|                |...:.:.|.|        
 Frog   101 VRALRRLAEAAEKFQKAHRWQD-NIREEDI----------------EYYDSKADTEYEDLEGEEE 148

  Fly   371 --TTTESTYI----QPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQY 429
              ..|.|..|    .|:....:|...|.....|..|:.:.:|.:|      .|....:||:..| 
 Frog   149 PKEPTHSLKIDFADDPNFKAKVNYNYTAVQIPTDIYKGSTVILNE------LNWTDALEDVFIQ- 206

  Fly   430 NGKHKFTSTTSLTGKSNSREPTM--TTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTT 492
                           :...:||:  ..:.||.|:|.:                     .|:.|..
 Frog   207 ---------------NRLEDPTLLWQVFGSATGVTRY---------------------YPATPWR 235

  Fly   493 SNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSS 557
            :..::.::|            ::.....|:..|..|::......:|                   
 Frog   236 APSKIDLYD------------VRRRPWYIQGASSPKDMVIIVDVSG------------------- 269

  Fly   558 SQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKS 622
                                                 |::|.|...:.||..:..|.::|||..:
 Frog   270 -------------------------------------SVSGLTLKLMKTSVMEMLDTLSDDDYVT 297

  Fly   623 L-------------KHLI-------KILSDLVYSL--NDKNNIKSTSQLTTESTFNSSINITN-- 663
            :             :.|:       |::.:.|..:  ....:.|:..:.......|:||...|  
 Frog   298 VASFHEKADPVSCFRQLVQANVRNKKVIKEAVQEMVARGTTDYKAGFEYAFSQLQNTSITRANCN 362

  Fly   664 ------------------------STTVASSTFSTTESMAIHS---TP-----------YLSTRE 690
                                    :.||...|||..:    |:   ||           |.....
 Frog   363 KMIMMFTDGGEDRVQDVFEKYNWPNKTVRVFTFSVGQ----HNYDVTPLQWMACANKGYYFEIPS 423

  Fly   691 ITVFQFNDVENIN----PII--SNNSTTVT-TNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDST 748
            |...:.|..|.::    |::  .|.:..|. ||::......          .|..|.:.|.|:.|
 Frog   424 IGAIRINTQEYLDVLGRPMVLAGNEAKQVQWTNVYQDALGL----------GLVVTGTLPVFNLT 478

  Fly   749 ISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQ-----------LSPMLISRIK 802
            ....:.......||     :..|...|..:||:....:..:.|.           |.|.|..:|.
 Frog   479 EDSGSAGKNQLILG-----VMGIDVALDDIRKLMPRYSLGANGYMFAIDLNGYVLLHPNLKPQII 538

  Fly   803 AVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLL--KLFDDFERMYNVLLDDSIQ 865
            ...:.:....:|:...|..:.||............|..|:.|.|  :..|:.||.|         
 Frog   539 NFQEPVTLDFLDAELEDENKEEIRRKMIDGLEGQKTIRTLVKSLDERYIDEAERTY--------- 594

  Fly   866 STTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESN 930
                           |::.|.||..|:....|                    |.|...||::   
 Frog   595 ---------------TWAPIHSTNYSLGLVLP--------------------PYSSYYLRAN--- 621

  Fly   931 NHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQ 995
                ::|.|.|::       |:.||:::  .|.:|.  |...::.|  ....||...|::  |..
 Frog   622 ----LIDQILQVQ-------YSNKKTKD--FESLLP--NNFELEGR--VFLAPRQYCKEL--EQS 667

  Fly   996 KRNSDVKEDKI 1006
            ..|::..|:.|
 Frog   668 DNNTEFLENFI 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 28/167 (17%)
cacna2d2XP_012817109.1 VWA_N 111..234 CDD:369855 30/182 (16%)
vWFA 246..425 CDD:381780 30/238 (13%)
dCache_1 <445..609 CDD:376917 37/202 (18%)
VGCC_alpha2 638..1081 CDD:369894 11/49 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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