DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42818 and cacna2d1

DIOPT Version :9

Sequence 1:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster
Sequence 2:NP_001090738.1 Gene:cacna2d1 / 100036724 XenbaseID:XB-GENE-964524 Length:1076 Species:Xenopus tropicalis


Alignment Length:918 Identity:147/918 - (16%)
Similarity:283/918 - (30%) Gaps:318/918 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQ 104
            |:.:.:||......:...:.:.|....:.:.|..|.|          :::.||:::.::.:..:.
 Frog   102 KKAEEIQESHQWRDQFGTNSIVYYNAKDDQMDPEKND----------SDSASQKIKPVLQDDPVF 156

  Fly   105 DSKTEFQENRASQPKN--------MHSFQIPEAIESHFNNKELQNENDLHK------GLKQQYRS 155
            ..:|.:|.:....|.:        ::......|::..|.....::|..|.:      ||.:.|.:
 Frog   157 RRQTSYQHSAVHIPTDIYEGSTIVLNELNWTAALDEVFKKNREEDETLLWQVFGSATGLARYYPA 221

  Fly   156 GSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKD 220
            ....|||      ..|:|:                    |:..|......::...||:|::||.|
 Frog   222 SPWVDKS------RTANKI--------------------DLYDVRRRPWYIQGAASPKDMLILVD 260

  Fly   221 MLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSF-SQAIQNTN------------QNVDN 272
            :...:        .|.|....|..:::.:||...  |.| :.|..|.|            .||.|
 Frog   261 VSGSV--------SGLTLKLIRTSVSEMLETLSD--DDFVNVAAFNNNAHDVSCFNHLVQANVRN 315

  Fly   273 IANVYEVMEN--------------------LNKNL-----RELVILLSD------KESFPTTESS 306
            ...:.|.:.|                    ||.|:     .::::|.:|      ||:|   |:.
 Frog   316 KKKLKEAVNNITAKGTTDYKTGFKFAFDQLLNHNVSRANCNKIIMLFTDGGEDKAKETF---EAY 377

  Fly   307 SSQQTTSIYA------------------------------------------------------- 316
            :..:|..::.                                                       
 Frog   378 NKDKTVRVFTFSVGQHNYDKGPIQWMACQNKGFYYEIPSIGAIRINTQEYLDVLGRPMVLAGDKA 442

  Fly   317 ----TTTFYLTSSTFG----STHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTS-------S 366
                .|..||.:...|    .|.|:.:..::.......||.|:..:.|.:::..:.:       :
 Frog   443 KQVQWTNVYLDALELGLVITGTLPVFNLTVDHNGKKNQLILGVMGVDVSLEDIKRLTPRFTLCPN 507

  Fly   367 STSYTTTESTYI--------------QPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFN 417
            ...:....:.|:              :|.|..:|:||:...|......::.::.:.||..:   .
 Frog   508 GYYFALDPNGYVLLHPNLQPKDLKSQEPVTLDFLDAELENDHKVEIRTKMIDLESGESTFQ---T 569

  Fly   418 LIKGIEDLISQYNGKHKFTSTTS-LTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHS 481
            |:|..::   :|..:...|.|.. :||         |.||....:.|:.|               
 Frog   570 LVKSQDE---RYIDRGNRTYTWGPVTG---------TDYSLGLVLPSYGF--------------- 607

  Fly   482 TTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPT 546
                   :...:.:|.::....|.:||:..:  :.||  :|||.:|                   
 Frog   608 -------YYIKAAFEESMTQAKSKRFKIQDS--ETLK--LEHFEET------------------- 642

  Fly   547 ATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDF 611
                         ..||.......|:|:      :||.:|...||.. |.....|||..:...|.
 Frog   643 -------------GYTFLAPREYCTDLK------ISTNNTEFLLNFN-SFIDRKTPNSPSCNTDM 687

  Fly   612 KDQINDD------------DSKSLKHLIK--ILSD----LVYSLNDKNNIKSTSQLTTESTFNSS 658
            .:::..|            ..:|.|.::.  :.:|    .||......:.....:....|.:..|
 Frog   688 VNRVLLDAGFTFELAQLHWKGQSPKGILARFVATDGGITRVYPSFAGEDWPEDPETYEGSFYKRS 752

  Fly   659 INITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYT 723
            ::..|....|.....|..|.|..........|||:    |.:.:.|.:.  ...:..|.....:|
 Frog   753 LDNDNYVFTAPYFNKTRGSRADSGIMVSKAIEITI----DGKLLKPAVV--GIKIDVNSWMENFT 811

  Fly   724 TSTTDNTTSYPNLSTTESSPTFDSTISH-------SNTSSQTRSLGSYKDKIKNIVELLKKLRKI 781
            ..||.|             |..|..|..       ||.......:|.:..:|.  ..|:::|..|
 Frog   812 RDTTKN-------------PQLDCVILDDGGFLLMSNQEDHITQIGRFFGEID--PSLMRQLVNI 861

  Fly   782 QKTLADKS 789
            .....:||
 Frog   862 SVYAFNKS 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 22/127 (17%)
cacna2d1NP_001090738.1 VWA_N 104..224 CDD:285584 18/129 (14%)
vWA_VGCC_like 240..418 CDD:238740 31/190 (16%)
Cache_1 447..528 CDD:280839 11/80 (14%)
VGCC_alpha2 541..625 CDD:285647 20/120 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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