DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42728 and obst-J

DIOPT Version :10

Sequence 1:NP_001189111.1 Gene:CG42728 / 10178859 FlyBaseID:FBgn0261681 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_649179.2 Gene:obst-J / 40202 FlyBaseID:FBgn0036940 Length:353 Species:Drosophila melanogaster


Alignment Length:145 Identity:31/145 - (21%)
Similarity:50/145 - (34%) Gaps:33/145 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IPECSGQNGFINNTRSNCNYSLINCSGQNSMFCTDNTT------CNANFTC-------------- 72
            :.:||..| :.:..|..|....|:.:.|.|....||.|      |...|.|              
  Fly   116 VAKCSVGN-YFDPARRACLPVAISAAHQCSCVLPDNATLANPSDCETYFRCHSGQAELVQCPSGD 179

  Fly    73 ------SDILPVDNSTALPISTTPNVVTTASTTVSPSDIRRECRQGVTKRFSYPQNCNYFYYCVD 131
                  |..:|......|...|.|..:|..:..:.      ||.:..::...:.::|..:|.|..
  Fly   180 YFDERVSSCVPDHTGICLEKPTMPPTLTEQALAMD------ECIRTGSRLAPHSRDCQRYYICAK 238

  Fly   132 GFLLVEQCPIGYAFD 146
            ..:|..:||.|..||
  Fly   239 KRVLEMRCPRGQYFD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42728NP_001189111.1 CBM_14 117..152 CDD:426342 9/30 (30%)
obst-JNP_649179.2 ChtBD2 <40..79 CDD:214696
CBM_14 145..192 CDD:426342 8/46 (17%)
CBM_14 216..259 CDD:426342 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.