DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42728 and obst-E

DIOPT Version :10

Sequence 1:NP_001189111.1 Gene:CG42728 / 10178859 FlyBaseID:FBgn0261681 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_723116.1 Gene:obst-E / 33806 FlyBaseID:FBgn0031737 Length:249 Species:Drosophila melanogaster


Alignment Length:153 Identity:39/153 - (25%)
Similarity:54/153 - (35%) Gaps:48/153 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NGLNIPECSGQNGFINN-------TRSNCNY---SLINCSGQNSMFCTDNT----------TCNA 68
            ||..  ||..|.||..|       ...||.:   ||..|  ...:...:.|          :|||
  Fly    88 NGTE--ECPRQFGFYPNGDATKCGVYRNCAHGVASLTKC--PEGLAFNEETYQCDWPDLVESCNA 148

  Fly    69 ----NFTCSDILPVDNSTALPISTTPNVVTTASTTVSPSDIRRECRQGVTKRFSYPQNCNYFYYC 129
                .|.|......|:|.|            |:..|||        :|..:.:.:||.|..::.|
  Fly   149 EAYLGFNCPAADSADDSAA------------AAVDVSP--------EGELRYYRHPQTCKKYFVC 193

  Fly   130 VDGFLLVEQCPIGYAFDPQTGAC 152
            |:|...:..|....||:.||..|
  Fly   194 VNGHPRLYNCGKYLAFNSQTKLC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42728NP_001189111.1 CBM_14 117..152 CDD:426342 11/34 (32%)
obst-ENP_723116.1 ChtBD2 23..65 CDD:214696
CBM_14 95..146 CDD:426342 10/52 (19%)
CBM_14 180..225 CDD:426342 12/37 (32%)
Blue background indicates that the domain is not in the aligned region.

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