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Protein Alignment CG42815 and Abca2
DIOPT Version :9
Sequence 1: | NP_001189127.1 |
Gene: | CG42815 / 10178812 |
FlyBaseID: | FBgn0261997 |
Length: | 101 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006233707.2 |
Gene: | Abca2 / 79248 |
RGDID: | 620238 |
Length: | 2435 |
Species: | Rattus norvegicus |
Alignment Length: | 101 |
Identity: | 25/101 - (24%) |
Similarity: | 36/101 - (35%) |
Gaps: | 25/101 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 CASSGDTATKTGTGTGTGTGTGTGTGTGTAT-----TSTTVAPTTTSTTTAEATV---------- 71
||... .|.:.|:.:|....||.|..||..| |.:.|.|.:..|...:.:.
Rat 352 CAGRA-PAPQAGSPSGPANSTGVGANTGPNTTVEEGTQSPVTPASPDTLQGQCSAFVQLWAGLQP 415
Fly 72 ----HHRRIHRR--RRRNLRRLRHRRAEAERRRRLG 101
::|.|... ||.|:..|.....| :|.||
Rat 416 ILCGNNRTIEPEALRRGNMSSLGFTSKE---QRNLG 448
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG42815 | NP_001189127.1 |
None |
Abca2 | XP_006233707.2 |
rim_protein |
1..2369 |
CDD:130324 |
25/101 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0059 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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