DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42815 and Abca17

DIOPT Version :9

Sequence 1:NP_001189127.1 Gene:CG42815 / 10178812 FlyBaseID:FBgn0261997 Length:101 Species:Drosophila melanogaster
Sequence 2:NP_001026792.2 Gene:Abca17 / 381072 MGIID:3625331 Length:1733 Species:Mus musculus


Alignment Length:59 Identity:15/59 - (25%)
Similarity:23/59 - (38%) Gaps:14/59 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 TGTGTATTSTTVAPTTTSTTTAEATVH-------HRRIHRRRRRNLRRL-RHRRAEAER 96
            |..|.:|.:|:|      ||..|..:.       ...:...:|.:|..| ||.|...:|
Mouse   807 TELGISTFATSV------TTMEEVFIRVCKLADPSTNVLTEKRHSLHPLPRHHRVPVDR 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42815NP_001189127.1 None
Abca17NP_001026792.2 rim_protein <209..1684 CDD:130324 15/59 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1681..1733
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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