DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42815 and CG1494

DIOPT Version :9

Sequence 1:NP_001189127.1 Gene:CG42815 / 10178812 FlyBaseID:FBgn0261997 Length:101 Species:Drosophila melanogaster
Sequence 2:NP_001259763.1 Gene:CG1494 / 33102 FlyBaseID:FBgn0031169 Length:1695 Species:Drosophila melanogaster


Alignment Length:108 Identity:22/108 - (20%)
Similarity:37/108 - (34%) Gaps:19/108 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLPLTLAVIAICC---------MSFIECASSGDTATKTGTGTGTGTGTGTGTGTGTATTSTTVA 58
            |::...|.:|.:.|         :.|.:|...    |:|.....:...:....|..:..|:..|.
  Fly  1285 LVILTLLDIILLACLFVSEYHSILGFADCRLD----TRTNESPDSNQESRAFPGILSNDTAALVD 1345

  Fly    59 PTTTSTTTAEATVHHRRI------HRRRRRNLRRLRHRRAEAE 95
            ...||....|....:..:      ..||.|.||.|....|::|
  Fly  1346 KEHTSRLNEEERSKYAAVGIGIVSKYRRNRVLRDLDFTLAKSE 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42815NP_001189127.1 None
CG1494NP_001259763.1 ABC2_membrane_3 <263..480 CDD:289468
CcmA 541..848 CDD:224054
ABC_subfamily_A 541..761 CDD:213230
ABC2_membrane_3 911..>1189 CDD:289468
ABC2_membrane <1080..>1188 CDD:304374
ABC_subfamily_A 1370..1577 CDD:213230 8/19 (42%)
PRK14255 1371..1586 CDD:172743 8/18 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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