DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42815 and Abca17

DIOPT Version :9

Sequence 1:NP_001189127.1 Gene:CG42815 / 10178812 FlyBaseID:FBgn0261997 Length:101 Species:Drosophila melanogaster
Sequence 2:NP_001026807.1 Gene:Abca17 / 287112 RGDID:1560494 Length:1773 Species:Rattus norvegicus


Alignment Length:19 Identity:5/19 - (26%)
Similarity:14/19 - (73%) Gaps:0/19 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLLLPLTLAVIAICCMSF 19
            :::||||.:.::::...:|
  Rat   916 VQILLPLVIIMLSLSFFNF 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42815NP_001189127.1 None
Abca17NP_001026807.1 ABC2_membrane_3 <262..464 CDD:289468
ABC_subfamily_A 525..746 CDD:213230
drrA 543..834 CDD:130256
ABC2_membrane_3 913..1255 CDD:289468 5/19 (26%)
CcmA 1369..1682 CDD:224054
ABC_subfamily_A 1369..1590 CDD:213230
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1690..1773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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