DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42815 and ABCA8

DIOPT Version :9

Sequence 1:NP_001189127.1 Gene:CG42815 / 10178812 FlyBaseID:FBgn0261997 Length:101 Species:Drosophila melanogaster
Sequence 2:NP_001275914.1 Gene:ABCA8 / 10351 HGNCID:38 Length:1621 Species:Homo sapiens


Alignment Length:20 Identity:8/20 - (40%)
Similarity:11/20 - (55%) Gaps:0/20 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KLLLPLTLAVIAICCMSFIE 21
            |.||.|.|.::|..|...:|
Human   861 KALLALLLILMAGFCPLLVE 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42815NP_001189127.1 None
ABCA8NP_001275914.1 rim_protein <235..>790 CDD:130324
ABC_subfamily_A 480..703 CDD:213230
rim_protein <1033..1598 CDD:130324
ABC_subfamily_A 1285..1506 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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