DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and AT1G01310

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_171638.2 Gene:AT1G01310 / 839333 AraportID:AT1G01310 Length:241 Species:Arabidopsis thaliana


Alignment Length:179 Identity:45/179 - (25%)
Similarity:66/179 - (36%) Gaps:37/179 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KLNLGDKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNT 120
            ::|...:..|| ||||||.:  .|:...:|..             :||............:|...
plant    80 RVNRASREFLI-AHNLVRAR--VGEPPFQWDG-------------RLAAYARTWANQRVGDCRLV 128

  Fly   121 EKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIGH 185
            ......|:|:|..|         |.|.:...:    |..||.|:|   ..|:|..|..|..:.||
plant   129 HSNGPYGENIFWAG---------KNNWSPRDI----VNVWADEDK---FYDVKGNTCEPQHMCGH 177

  Fly   186 LTVLINEKSNAVGCGLVAYNLGEIRR---YNLACNYAYTNVIGERVYEE 231
            .|.::...|..|||..|..:.|.:..   ||...||...|..|.  |::
plant   178 YTQIVWRDSTKVGCASVDCSNGGVYAICVYNPPGNYEGENPFGS--YDD 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 40/159 (25%)
AT1G01310NP_171638.2 SCP_PR-1_like 87..219 CDD:240181 42/163 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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