DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG42780 and AT5G57625

DIOPT Version :9

Sequence 1:	NP_001284979.1	Gene:	CG42780 / 10178796	FlyBaseID:	FBgn0261848	Length:	254	Species:	Drosophila melanogaster
Sequence 2:	NP_680450.1	Gene:	AT5G57625 / 835867	AraportID:	AT5G57625	Length:	207	Species:	Arabidopsis thaliana

Alignment Length:	240	Identity:	47/240 - (19%)
Similarity:	76/240 - (31%)	Gaps:	55/240 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 VFTFNIFVLSLVLHSLAENFCRQDLCTKGTTHIACQNVNGSFGSSCPKDA----TVIKLNLGD-K 62
            |..|.|.:|.:...::..::.||......|.::  ........|..||..    |...|..|. .
plant    10 VIVFTISLLLVAFQAVHADYYRQRPPVTPTPYV--PKPRYPLPSPSPKPVYRPPTTPSLPAGSIA 72

  Fly    63 NALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFRLSG 127
            ...:..||.:|.  ..|...:.|.....:...|..:..:.             :|..|......|
plant    73 RLFLDPHNALRS--GLGLPPLIWDGKLASYATWWANQRRY-------------DCSLTHSTGPYG 122

  Fly   128 QNLF-------AMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIGH 185
            :|||       |.||                    |||.|..|.:   :.:....:.:...:.||
plant   123 ENLFWGSGSSWAPGF--------------------AVQSWIVEGR---SYNHNTNSCDGSGMCGH 164

  Fly   186 LTVLINEKSNAVGCGLVAYNLGEIRRYNLACNY-AYTNVIGERVY 229
            .|.::...:..:||..|....|  ....:.||| ...|.:||:.|
plant   165 YTQMVWRDTKRLGCARVVCENG--AGVFITCNYDPPGNYVGEKPY 207

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42780	NP_001284979.1	SCP_euk	62..219	CDD:240180	30/164 (18%)
AT5G57625	NP_680450.1	CAP_PR-1	72..207	CDD:349400	33/174 (19%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820