DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42780 and AT4G33730

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_195099.1 Gene:AT4G33730 / 829515 AraportID:AT4G33730 Length:172 Species:Arabidopsis thaliana


Alignment Length:172 Identity:40/172 - (23%)
Similarity:61/172 - (35%) Gaps:44/172 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 NALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDEC---HNTEKFR 124
            ::.::.||..|            .|.|:..:.|:..:..:|...|.....|  .|   |::..: 
plant    40 DSYLRPHNAAR------------AAVKVKPLRWDFGIATVAQDYANHLASG--PCSLEHSSGPY- 89

  Fly   125 LSGQNL-FAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIGHLTV 188
              |:|| |..|               .|....||..|..|:   :..|....:.:.| ..||.|.
plant    90 --GENLAFGSG---------------DMSAAQAVAMWVHEK---SYYDFYSNSCHGP-ACGHYTQ 133

  Fly   189 LINEKSNAVGCGLVAYNLGEIRRYNLACNY-AYTNVIGERVY 229
            ::...|..:|||....|.|   ...:.||| ...|.||.|.|
plant   134 VVWRGSARLGCGKAKCNNG---ASIVVCNYDPAGNYIGARPY 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 35/160 (22%)
AT4G33730NP_195099.1 CAP_PR-1 39..172 CDD:349400 39/170 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.