DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and AT2G19980

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_179588.1 Gene:AT2G19980 / 816517 AraportID:AT2G19980 Length:165 Species:Arabidopsis thaliana


Alignment Length:148 Identity:32/148 - (21%)
Similarity:50/148 - (33%) Gaps:41/148 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 AKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLS----- 150
            ::|:..:..|.||:             ||  :.|.:.|.|.|....:|.:......|..|     
plant    28 SRMDDLQPAETLAV-------------HN--QIRAADQKLAAHAQRYANVRSQDCAMKYSTDGTY 77

  Fly   151 --------------MLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIGHLTVLINEKSNAVGCGL 201
                          |...:|.:.|..|:........|.:.|     .||.|.::..:|..:|||.
plant    78 GENIAAGWVQPMDTMSGPIATKFWFTEKPYYNYATNKCSEP-----CGHYTQIVANQSTHLGCGT 137

  Fly   202 VAYNLGEIRRYNLACNYA 219
            |.....|.  ..:.||||
plant   138 VRCFKNEY--VWVVCNYA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 30/146 (21%)
AT2G19980NP_179588.1 SCP 35..165 CDD:294090 31/141 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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