DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and crispl

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001025526.1 Gene:crispl / 594930 XenbaseID:XB-GENE-5768874 Length:314 Species:Xenopus tropicalis


Alignment Length:201 Identity:41/201 - (20%)
Similarity:71/201 - (35%) Gaps:53/201 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFRL 125
            ::.:::..||.:|:       ........|.||.|:....|.|...|.:|    .:.|:.:..|.
 Frog   107 NRQSILNVHNELRR-------NANPPPSNMLKMVWSDLAAKSAAKWANSC----KQYHSLKPERT 160

  Fly   126 -----SGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEV--- 182
                 .|:|||...:..:              :|..::.:..|.:|.......|      ||   
 Frog   161 IPGFSCGENLFMASYKAS--------------WEDVIRAFYSEIEDFLYGKGAK------EVGLQ 205

  Fly   183 IGHLTVLINEKSNAVGCG-----LVAYNLGEIRRYNLACNYA----YTNV-IGERVYEECAKAGI 237
            |.|.|.::...|..|||.     :..::|    .:...|:||    |.|| |..:..:.|.....
 Frog   206 ILHFTQVMWFSSWLVGCAAAQCPITDHSL----EFYFVCHYAPAGNYGNVGIPYKTGKPCEDCKS 266

  Fly   238 ECAKGI 243
            .|..|:
 Frog   267 SCENGL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 32/169 (19%)
crisplNP_001025526.1 CAP_CRISP 106..245 CDD:349402 34/172 (20%)
Crisp 261..314 CDD:369954 3/12 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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