DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and r3hdml

DIOPT Version :10

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:204 Identity:50/204 - (24%)
Similarity:71/204 - (34%) Gaps:48/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFRL 125
            |..||:..||.||       :::...|..|..|.|::.|.|.|...|..|:..|...|..:..  
Zfish    65 DMTALLDYHNRVR-------SQVFPPAANMEYMVWDERLAKSAEFWASQCIWEHGPHHFLQHI-- 120

  Fly   126 SGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIG----HL 186
             ||||..:...:..|..             .|:.|..|....:         .|....|    |.
Zfish   121 -GQNLSIISGRYKSIID-------------LVKSWYDERHSFS---------YPSRCSGSVCTHY 162

  Fly   187 TVLINEKSNAVGCGLV----AYNLGEIRRYN--LACNYAYT-NVIGERVYEECAKAGIECAKGID 244
            |.::...||.:||.:.    .:..|.:.:..  |.||||.. |.:||..|    |.|..|: ...
Zfish   163 TQMVWAASNKIGCAIKKCSDIFVFGSMWKQATLLVCNYAIKGNWVGEAPY----KIGRPCS-ACP 222

  Fly   245 QKYPPLCAK 253
            ..|...|.|
Zfish   223 SSYGGSCNK 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 CAP_euk 62..219 CDD:349399 37/166 (22%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 37/166 (22%)

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