DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42780 and glipr2l

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001005978.1 Gene:glipr2l / 449805 ZFINID:ZDB-GENE-041010-53 Length:154 Species:Danio rerio


Alignment Length:156 Identity:34/156 - (21%)
Similarity:54/156 - (34%) Gaps:35/156 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 IKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFRLS-GQN 129
            :|.||..|:|..:...|:....|..|. .:.:.|....||.           |:.|..|.: |:|
Zfish    14 LKTHNEYRRKHQAPPLKLSSKLCSEAS-RYAESLASTRILK-----------HSVESSRGNCGEN 66

  Fly   130 LFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIGHLTVLINEKS 194
            |     :.|...:|..::|         .:|..|     ........|......||.|.::.:.|
Zfish    67 L-----AWASYDQTGKDVT---------DRWYNE-----VNQYNFNQPGFSSGTGHFTAVVWKGS 112

  Fly   195 NAVGCGLVAYNLGE---IRRYNLACN 217
            ..:|.|....:.|.   :.||..|.|
Zfish   113 KKLGVGKAVASDGSTFVVARYFPAGN 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 34/156 (22%)
glipr2lNP_001005978.1 SCP_GAPR-1_like 9..139 CDD:240182 34/156 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.