DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scpr-B

DIOPT Version :10

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster


Alignment Length:247 Identity:79/247 - (31%)
Similarity:121/247 - (48%) Gaps:12/247 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFVLSLVLHSLAENFCRQDLCTKGTTHIACQNVNGSFGSSCPKDATVIKLNLGDKNALIKAHNLV 72
            |.:.||:..|||.::|....|.  ..||||.| .|:|..:||||...:|:....| .::...|.:
  Fly     7 ILLTSLLGISLAADYCALPTCL--DKHIACNN-KGNFSENCPKDVREVKIEPHHK-LILNLFNEL 67

  Fly    73 RQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFRLSGQNLFAMGFSH 137
            |...|.||.:....|.:||||.|.::|..||:||.|||....|:|.:||:|..:|||.....:|.
  Fly    68 RNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQYSG 132

  Fly   138 ARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPN-PPEVIGHLTVLINEKSNAVGCGL 201
            |     :...|.:.:.:..::.|..|..:.:.|.|...... |.:.:...|:.:.||:..|||..
  Fly   133 A-----ETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAA 192

  Fly   202 VAYNLGEIRRYNLACNYAYTNVIGERVYEECAKAGIECAK--GIDQKYPPLC 251
            |.::......:.|.||:|.:|::|:.||....||...|..  |....||.||
  Fly   193 VRFSRDFYNHFVLTCNFATSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLC 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 CAP_euk 62..219 CDD:349399 46/157 (29%)
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 46/158 (29%)

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