DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and CG3640

DIOPT Version :10

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_611950.1 Gene:CG3640 / 37942 FlyBaseID:FBgn0035042 Length:296 Species:Drosophila melanogaster


Alignment Length:265 Identity:76/265 - (28%)
Similarity:127/265 - (47%) Gaps:35/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VFTFNIFVLSLVLHSL------AENFCRQDLCTKGTTHIACQNVNGSFGSSCPKDATVIKLNLGD 61
            :|:..::.:.||:.:|      :.::|::..|.:.|.|:||.| ||:||..|.::|.:|.|:...
  Fly     1 MFSIRVWFICLVIVTLNSFPAYSWDYCQEHWCPRSTDHVACNN-NGTFGLDCGREARLIPLSNQL 64

  Fly    62 KNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEKFR-- 124
            :..::...|..|.:.|||.......|.:||.:.|:.:|.:||.|.||.|.:..|.|.||.:|:  
  Fly    65 QAFIVHQVNFYRNQVASGGLSAFGPARRMASVRWDPELAQLAELAAKRCSLSGDGCRNTRRFKHV 129

  Fly   125 --LSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGE----EKDITAEDLKKTTPNPPEVI 183
              |:|..:|:.| .|:.:.          |....:..|.|:    .||:.|.|       |...|
  Fly   130 GQLTGHVIFSAG-KHSDLE----------LLRHKISNWFGQYMRASKDLQAAD-------PSSNI 176

  Fly   184 GHLTVLINEKSNAVGCGLVAYNLGEI-RRYNLACNYAYTNVIGERVYEECAKAGIECAKGIDQKY 247
            .....||.|.|..:|||::......: .:..:.||:|..|:..|:|| :...|...|..|.:.:|
  Fly   177 SSFRQLIQESSTHMGCGVLRQRSHMLWHQQFIVCNFARRNMPREQVY-QVGVAATGCRSGRNPRY 240

  Fly   248 PPLCA 252
            |.|||
  Fly   241 PNLCA 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 CAP_euk 62..219 CDD:349399 44/165 (27%)
CG3640NP_611950.1 CAP_euk 65..213 CDD:349399 44/165 (27%)

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