DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and Glipr1l2

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:XP_002729829.4 Gene:Glipr1l2 / 366890 RGDID:1310205 Length:228 Species:Rattus norvegicus


Alignment Length:213 Identity:49/213 - (23%)
Similarity:71/213 - (33%) Gaps:60/213 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 NALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGH----DECHNTEKF 123
            |..:..||.:|.........:::       |.|:..|.:.|....|.|:...    |:.|.    
  Rat    54 NEYVNLHNELRGTVFPPGVNLRF-------MTWDVALSRTARAWGKKCVFERNTHLDKVHE---- 107

  Fly   124 RLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITA--------EDLK-----KT 175
                        ||...|....||            |.|.|||.||        |:.|     ..
  Rat   108 ------------SHPVFTDIGENM------------WVGPEKDFTATNAIRSWHEERKSYNYVND 148

  Fly   176 TPNPPEVIGHLTVLINEKSNAVGCGLV-AYNLGEIRRYNL-ACNYAYTNVIGERVYEECAKAGIE 238
            |....|...|...|:.:.|..|||.:. ...:|.|....| .||||....:..|.|:    ||..
  Rat   149 TCIEDEDCSHYIQLVWDHSYKVGCAVTPCAKVGAITYAALFICNYAPGGTLTRRPYQ----AGQF 209

  Fly   239 CAKGIDQK--YPPLCAKI 254
            |::..:::  ...||.|:
  Rat   210 CSRCTNEEKCIDFLCGKM 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 39/174 (22%)
Glipr1l2XP_002729829.4 CAP 51..197 CDD:412178 41/177 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344802
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5171
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.900

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