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Protein Alignment CG42780 and Clec18a
DIOPT Version :9
Sequence 1: | NP_001284979.1 |
Gene: | CG42780 / 10178796 |
FlyBaseID: | FBgn0261848 |
Length: | 254 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038954171.1 |
Gene: | Clec18a / 307851 |
RGDID: | 1559899 |
Length: | 497 |
Species: | Rattus norvegicus |
Alignment Length: | 179 |
Identity: | 38/179 - (21%) |
Similarity: | 70/179 - (39%) |
Gaps: | 36/179 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 PKDATVIK-LNLGDKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLM 112
||...::: |:..:...::..||.:| :::..:|..|.:|:|::.|.:|| .|:..|.
Rat 61 PKQVPIVQALSRKESFLILTTHNRLR-------SQVHPSAANMQRMDWSESLAQLA--QARAALC 116
Fly 113 GHDECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTL----SMLFEMAVQKWAGE---EKDITAE 170
|... |.....:.:|...:|: |:.| |..|...|..|..| .:..:||
Rat 117 GTSA---TPNLAATLRNTPDVGW----------NVQLLPMGSASFVEVVNVWFAEGLQYRHGSAE 168
Fly 171 DLKKTTPNPPEVIGHLTVLINEKSNAVGCGLVAYNLGEIRRYNLACNYA 219
.....| ..|.|.|:...|:.:|||.....:.::......|.|:
Rat 169 CAHNAT------CAHYTQLVWATSSQLGCGWQPCFVDQVATEAFVCAYS 211
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG42780 | NP_001284979.1 |
SCP_euk |
62..219 |
CDD:240180 |
34/163 (21%) |
Clec18a | XP_038954171.1 |
CAP_euk |
77..211 |
CDD:349399 |
34/161 (21%) |
CLECT |
361..485 |
CDD:153057 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166344567 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.940 |
|
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