DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-19

DIOPT Version :10

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_507654.2 Gene:scl-19 / 191308 WormBaseID:WBGene00013971 Length:207 Species:Caenorhabditis elegans


Alignment Length:217 Identity:46/217 - (21%)
Similarity:77/217 - (35%) Gaps:66/217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KLNLGDKNALIKAHNLVRQKWA----SGKAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDE 116
            :|:...:..::..||.:|.:.|    |....||..|..|.::.:.:..|:||......|..|.: 
 Worm    17 QLSPNGRQQVLDFHNKLRSQVALGVFSANGTIKPPARNMERLTYGQQFERLAQDYVADCPDGLE- 80

  Fly   117 CHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEM---AVQKWAGEEKDITAEDLKKTTPN 178
               ....|..|.|.:.          ||::.|.:.:.|.   |:..||.|.              
 Worm    81 ---IPIGRNIGMNYYT----------TKVDETYNSMDEYVIDALNDWAEEF-------------- 118

  Fly   179 PPEVIGHLTVLINEKS------------NAVGCGLV---AYNLGEIRRYNLACNYAYTNVIGERV 228
              :|.|.|:.:.|:.|            ..||||:.   ..|:..:..|     |...|::|..:
 Worm   119 --QVNGWLSTIYNDTSISAASQMVWAGTKYVGCGVKRCDPINVVVVCMY-----YQQGNLVGRPI 176

  Fly   229 YEECAKAGIECAKGIDQKYPPL 250
            |:|    |..|.     ..||:
 Worm   177 YKE----GPPCT-----ACPPM 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 CAP_euk 62..219 CDD:349399 36/178 (20%)
scl-19NP_507654.2 SCP 21..167 CDD:214553 36/180 (20%)

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