DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-17

DIOPT Version :10

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:227 Identity:52/227 - (22%)
Similarity:83/227 - (36%) Gaps:69/227 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 DKNAL---IKAHNLVRQKWASG----KAKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHD--- 115
            ||:.:   :.|||..|...|.|    |..:...|..:.||:||..:...|..:|..|..|||   
 Worm    20 DKSGVQQTLDAHNEFRSSIAKGTYVTKGLLHAPATNIMKMKWNVTIATAAQNHANKCPKGHDGPL 84

  Fly   116 -----ECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGE------EKDITA 169
                 ||      ..||....:.|.:|              |..:|.:.|:.|      |.|:.:
 Worm    85 EGVSGEC------MWSGHINASKGVNH--------------LGAVAAKAWSSEYTKKGWETDVMS 129

  Fly   170 EDLKKTTPNPPEVIGHLTVLINEKSNAVGCGL-VAYNLGEIRRYNLACNY---AYTNVIGERVYE 230
            ::...:.      :||..::.......||||: :....|:.:...:.|.|   ...|  |:.:||
 Worm   130 DEFFNSG------VGHAIIMTWYSQVNVGCGVKLCQKEGDYQLAIVVCKYWGEGQGN--GKIMYE 186

  Fly   231 ECAKAGIEC-----------AKGI-DQKYPPL 250
                :|..|           |.|: |.|.|.:
 Worm   187 ----SGPTCSACPPNTTCDQATGLCDSKIPDI 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 CAP_euk 62..219 CDD:349399 40/181 (22%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 38/174 (22%)

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