DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-21

DIOPT Version :10

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_507793.1 Gene:scl-21 / 189870 WormBaseID:WBGene00012816 Length:198 Species:Caenorhabditis elegans


Alignment Length:220 Identity:56/220 - (25%)
Similarity:89/220 - (40%) Gaps:47/220 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IACQNVNGSFGSSCPKDATVIKLNLGDKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDL 99
            :|..:|:..|.:|..|:   |...:.|..:|:.:.   |....|...:....|..|.||.||..|
 Worm     9 LAAVSVHAQFSASAQKE---IVTYINDLRSLVASR---RFHLDSRDVETLPPASDMLKMTWNSTL 67

  Fly   100 EKLAILNAKTCLMGHDECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEE 164
            ...|...||||.:..:..              :.|.:..||....: :|::   :.|:..|   :
 Worm    68 AVAAQKLAKTCFIAVESS--------------SPGIADKRIVAANV-VTVA---KNALGHW---K 111

  Fly   165 KDITAE-DLKKTTPNPPEVIGHLTVLINEKSNAVGCGLVAYNLGEI-----RRYNLACNYAYT-N 222
            ..:..| :||....|   .||  ..||..||::||||   ::..||     |.|.:.|::... .
 Worm   112 HSLNKEWNLKSYNSN---YIG--IQLIWAKSSSVGCG---FSPCEIDSQGRRWYKVVCSFEKKGG 168

  Fly   223 VIGERVYE-----ECAKAGIECAKG 242
            :..|.||:     |...||.:||.|
 Worm   169 ITREPVYKKGKACEACPAGTKCASG 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 CAP_euk 62..219 CDD:349399 40/162 (25%)
scl-21NP_507793.1 CAP_euk 23..163 CDD:349399 43/174 (25%)

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