DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-21

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_507793.1 Gene:scl-21 / 189870 WormBaseID:WBGene00012816 Length:198 Species:Caenorhabditis elegans


Alignment Length:220 Identity:56/220 - (25%)
Similarity:89/220 - (40%) Gaps:47/220 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IACQNVNGSFGSSCPKDATVIKLNLGDKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDL 99
            :|..:|:..|.:|..|:   |...:.|..:|:.:.   |....|...:....|..|.||.||..|
 Worm     9 LAAVSVHAQFSASAQKE---IVTYINDLRSLVASR---RFHLDSRDVETLPPASDMLKMTWNSTL 67

  Fly   100 EKLAILNAKTCLMGHDECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEE 164
            ...|...||||.:..:..              :.|.:..||....: :|::   :.|:..|   :
 Worm    68 AVAAQKLAKTCFIAVESS--------------SPGIADKRIVAANV-VTVA---KNALGHW---K 111

  Fly   165 KDITAE-DLKKTTPNPPEVIGHLTVLINEKSNAVGCGLVAYNLGEI-----RRYNLACNYAYT-N 222
            ..:..| :||....|   .||  ..||..||::||||   ::..||     |.|.:.|::... .
 Worm   112 HSLNKEWNLKSYNSN---YIG--IQLIWAKSSSVGCG---FSPCEIDSQGRRWYKVVCSFEKKGG 168

  Fly   223 VIGERVYE-----ECAKAGIECAKG 242
            :..|.||:     |...||.:||.|
 Worm   169 ITREPVYKKGKACEACPAGTKCASG 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 40/162 (25%)
scl-21NP_507793.1 CAP_euk 23..163 CDD:349399 43/174 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.870

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