DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-18

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:228 Identity:51/228 - (22%)
Similarity:84/228 - (36%) Gaps:56/228 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TVIKLNLG--------DKNALIKAHNLVRQKWASG----KAKIKWTA-CKMAKMEWNKDLEKLAI 104
            |:::|:.|        .:..::..||.:|.:.|.|    |...|..| ..:.|..||..||:.|.
 Worm    21 TIVQLHKGVESIFSRKGQQDVLDHHNNIRSQLAFGNFVTKRHTKRAAGSNIKKFVWNATLERSAY 85

  Fly   105 LNAKTCLMGHDECHNTEKFRLSGQNLFAMGFSHARITKTKMN-----MTLSMLFEMAVQKWAGEE 164
            ..|:.....|....:.      |:||    |.|........|     ..||.:.|...:.|   :
 Worm    86 SFAQKNPSQHSFIPDI------GENL----FWHWSTRPGDFNKYGPMAALSWIKEFREKFW---D 137

  Fly   165 KDITAEDLKKTTPNPPEVIGHLTVLINEKSNAVGCGLVAYNLGEIRRYN--------LACNY-AY 220
            .:|...||..:.      :||.|.::...:..:||.:..:.  ||.:..        :.|:| ..
 Worm   138 SNILTNDLFGSG------VGHATQMVWADTYQMGCAVSHFK--EIHKRTGRPITKICVVCHYWPK 194

  Fly   221 TNVIGERVYEECAKAGIECAKGIDQKYPPLCAK 253
            .|.:.|.:|.|    |..|:|...:|    |.|
 Worm   195 GNYLNEPIYLE----GPPCSKCESKK----CDK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 38/175 (22%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 38/176 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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