DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-12

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_504056.1 Gene:scl-12 / 186714 WormBaseID:WBGene00019178 Length:208 Species:Caenorhabditis elegans


Alignment Length:200 Identity:53/200 - (26%)
Similarity:86/200 - (43%) Gaps:34/200 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KNALIKAHNLVRQKWASGK----AKIKWTACKMAKMEWNKDLEKLAILNAKTCLMGHDECHNTEK 122
            :.|::||||.:|...|.|.    ..|:..|..|.|::|:..:...|...|.||   .|:...|| 
 Worm    23 QTAIVKAHNDLRSAIALGNYDAAGTIEPPAANMRKIKWDSTVASSAQQYANTC---PDDHSGTE- 83

  Fly   123 FRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITAEDLKKTTPNPPEVIGHLT 187
               .|:||:....|.|..:..|..:..|..:|...|.:..|...:.| ||..:.      |||.|
 Worm    84 ---YGENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYMDA-DLFDSG------IGHAT 138

  Fly   188 VLINEKSNAVGCGLVAYNLGEIRRYN------LACNYAYT-NVIGERVYEE---CA--KAGIEC- 239
            .:...::|.:|||:  .|.|:....|      :.|.|... |::...:|:.   |:  .:|.:| 
 Worm   139 QMAWAETNKIGCGV--KNCGKDSSMNNMYKVAVVCQYDQAGNMMDSDIYQSGDTCSFCPSGSKCE 201

  Fly   240 -AKGI 243
             |.|:
 Worm   202 EASGL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 45/166 (27%)
scl-12NP_504056.1 SCP 21..175 CDD:214553 46/167 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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