DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-1

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:217 Identity:53/217 - (24%)
Similarity:87/217 - (40%) Gaps:53/217 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VNGSFGSSCPKDATVIKLNLGDKNALIKAHNLVRQKWASGKAKIKWTACKMAKMEWNKDLEKLAI 104
            ||..|.|:             .:::::.|||.:|    |..||..:.| |..|.|...|:.|:.:
 Worm    12 VNAQFTST-------------GQSSIVDAHNKLR----SAIAKSTYVA-KGTKKEPATDMRKMVV 58

  Fly   105 LN---------AKTCLMGHDECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKW 160
            .:         |.||..||      .|....|:||: ..::.|.:.      :|....|:|...|
 Worm    59 DSTVAASAQNYANTCPTGH------SKGTGYGENLY-WSWTSADVG------SLDSYGEIAAAAW 110

  Fly   161 AGEEKDITAEDLKKTTPNPPEVIGHLTVLINEKSNAVGCGLVAYNLG---EIRRYN---LACNYA 219
            ..|.:|...:.....|......|||.|.:....::::|||:  .|.|   .:|..|   :.|.|:
 Worm   111 EKEFQDFGWKSNAMDTTLFNSGIGHATQMAWANTSSIGCGV--KNCGRDASMRNMNKIAVVCQYS 173

  Fly   220 YT-NVIGERVYEECAKAGIECA 240
            .. |.:|..:|:|    |..|:
 Worm   174 PPGNTMGRPIYKE----GTTCS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 42/171 (25%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 43/187 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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