DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42780 and scl-23

DIOPT Version :9

Sequence 1:NP_001284979.1 Gene:CG42780 / 10178796 FlyBaseID:FBgn0261848 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_499859.3 Gene:scl-23 / 182028 WormBaseID:WBGene00015246 Length:330 Species:Caenorhabditis elegans


Alignment Length:217 Identity:48/217 - (22%)
Similarity:88/217 - (40%) Gaps:52/217 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 KLNLGDK--NALIKAHNLVRQKWASGKAKIK----WTACKMAKMEWNKDLEKLAILNAKTC---- 110
            :|||..:  |.::..||.:|.:.|.|:..:.    ..|..|.|::|:.:||..|...|:.|    
 Worm   114 RLNLPARLQNLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQCNLQK 178

  Fly   111 ------LMGHDECHNTEKFRLSGQNLFAMGFSHARITKTKMNMTLSMLFEMAVQKWAGEEKDITA 169
                  :.|.||        :.|:|.|..        :|...:.:|......:|:...|......
 Worm   179 ENSGRQMNGWDE--------VRGENAFYF--------RTTDGLDVSGAVLKGIQRMGDEIAIAGI 227

  Fly   170 EDLKKTTPNPPEVIGHLTVLINEKSNAVGCGL---VAYNLGEI--RRYNLA-CNYAYTNVIGERV 228
            ::||.:..:  ..|||.|.::.:::..:||.:   .|...|.:  ::||:| |.|..|.    .|
 Worm   228 KNLKLSRYD--SRIGHATQILWKETRKLGCAVQECPARQDGSLDGQKYNVAVCKYYPTG----NV 286

  Fly   229 YEECAKAGI--------ECAKG 242
            ::......|        .|::|
 Worm   287 FKSSTPTSIYSVGDVASACSEG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42780NP_001284979.1 SCP_euk 62..219 CDD:240180 39/178 (22%)
scl-23NP_499859.3 CAP_euk 122..281 CDD:349399 39/176 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157358
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.900

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