DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42716 and Crisp1

DIOPT Version :9

Sequence 1:NP_001189116.1 Gene:CG42716 / 10178784 FlyBaseID:FBgn0261633 Length:97 Species:Drosophila melanogaster
Sequence 2:NP_001034482.2 Gene:Crisp1 / 654517 RGDID:1590757 Length:254 Species:Rattus norvegicus


Alignment Length:75 Identity:19/75 - (25%)
Similarity:28/75 - (37%) Gaps:22/75 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TLNMAFANSQLRCRARMNSGGPRSCSGSRNIGTAFGLGCAMNFMPLVWYYNDKSRRCE-TMPYLG 74
            ||||.:.... .|:     ..|.:|..          |...|  |.::|  |:...|: .:..||
  Rat   189 TLNMPYKEGP-PCQ-----DCPNNCED----------GLCTN--PCLYY--DEYNNCDKQVKLLG 233

  Fly    75 CGGNSNR-FC 83
            |...:.| ||
  Rat   234 CSHPAVRPFC 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42716NP_001189116.1 KU <58..92 CDD:197529 9/28 (32%)
Crisp1NP_001034482.2 SCP 46..182 CDD:294090
Crisp 200..254 CDD:285731 15/63 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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