DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42716 and Glipr1l1

DIOPT Version :9

Sequence 1:NP_001189116.1 Gene:CG42716 / 10178784 FlyBaseID:FBgn0261633 Length:97 Species:Drosophila melanogaster
Sequence 2:XP_002729836.2 Gene:Glipr1l1 / 503139 RGDID:1563000 Length:235 Species:Rattus norvegicus


Alignment Length:95 Identity:17/95 - (17%)
Similarity:27/95 - (28%) Gaps:35/95 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ARMNSGGPRSCSGSRNIGTAFGLGCAMNF------------------MPLVWY-----YNDKSRR 66
            |::.....|.|..|.|..|:...||..::                  :...||     ||.....
  Rat    73 AKLAKSWTRECKFSHNPCTSKRHGCTKDYDYIGENIYLGKIDARPEDVVFSWYNETKDYNFDDNT 137

  Fly    67 CETMPYLGCGGNSNRF--------CSLQDC 88
            |...    ||..:...        |::.:|
  Rat   138 CTKT----CGHYTQVVWAKTLKIGCAISNC 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42716NP_001189116.1 KU <58..92 CDD:197529 9/44 (20%)
Glipr1l1XP_002729836.2 SCP 40..181 CDD:294090 17/95 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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