DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP6AP2 and vha-20

DIOPT Version :10

Sequence 1:NP_005756.2 Gene:ATP6AP2 / 10159 HGNCID:18305 Length:350 Species:Homo sapiens
Sequence 2:NP_510360.1 Gene:vha-20 / 181526 WormBaseID:WBGene00010993 Length:324 Species:Caenorhabditis elegans


Alignment Length:390 Identity:89/390 - (22%)
Similarity:155/390 - (39%) Gaps:111/390 - (28%)


- Green bases have known domain annotations that are detailed below.


Human     4 FVVLL-ALVAGVLGNEFSILKSPGSVVFRNGNWPIP-------GERIPDVAALSM-GFSVKEDLS 59
            ||:|: ||||....:...|:.:|.|:.|.:.:..:.       .|.|..::|..: ||||..|  
 Worm     3 FVLLVSALVAACAASSLEIIAAPASLKFPDADATLKTTLISTLNENILGLSARQVDGFSVSVD-- 65

Human    60 WPGLAVGNLFHRPRATVMVMVKGVNKLAL--PPGSVISYPLENAVPFSLDSVANSIHSLFSEE-- 120
                    :|.||||..:|.|.|.:.|.|  ...|..|..:|| |.|..|...     :|..:  
 Worm    66 --------MFSRPRALAVVTVIGADNLNLGGKTYSTKSDGVEN-VGFDQDMAL-----IFGADRE 116

Human   121 ---------TPVVLQLAPSEERVYMVGKANSVFEDLSVTLRQLRNRLFQENSVLSSLPLNSLSRN 176
                     |..:|.||..:|.|           |.:| ::..|:.|                  
 Worm   117 NVQVSAGGITGSMLALAAQQEAV-----------DATV-IKTKRSTL------------------ 151

Human   177 NEVDLLFLSELQVLHDISSLLSRHKHLAKDHSPDLYSLELAGLDEIGKRYGEDSEQFRDASKILV 241
                   :.||:.::.:::.: :...:..|::.|::.:.:.||..|     .:|.|..:|...:.
 Worm   152 -------VKELEAVYQLAAAI-KSAGVQMDNNADVFRVSITGLVGI-----TESAQKEEAVADVK 203

Human   242 DALQKFADDMYSLYGGNAVVELV---------------------TVKSFDTSLIRKTRTILEAKQ 285
            .|::.....:.:.|||.||:||:                     .::..||.....|:...|..|
 Worm   204 AAIEALTASINNAYGGQAVIELLAFEAESGAAEKSTESREIPNHNIQKRDTKSKTPTQLARENLQ 268

Human   286 AKNPASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRMD 350
            ...|.|.         :|..:|.:.|.:::.|.:|:|.....:.::||..||||||||..:::.|
 Worm   269 VTVPVSS---------DYPAIFAIFLGLVVILVVALIYIVVGMASIDPEKDSIIYRMTTTRMKKD 324

Human   351  350
             Worm   325  324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP6AP2NP_005756.2 Renin_r 254..350 CDD:462287 30/116 (26%)
Mediates retrograde transport to the ER. /evidence=ECO:0000269|PubMed:29127204 346..350 0/3 (0%)
vha-20NP_510360.1 Renin_r 216..324 CDD:462287 30/116 (26%)

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