DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDH17 and Cad99C

DIOPT Version :10

Sequence 1:NP_001400880.1 Gene:CDH17 / 1015 HGNCID:1756 Length:851 Species:Homo sapiens
Sequence 2:NP_733314.1 Gene:Cad99C / 43528 FlyBaseID:FBgn0039709 Length:1706 Species:Drosophila melanogaster


Alignment Length:1041 Identity:218/1041 - (20%)
Similarity:378/1041 - (36%) Gaps:301/1041 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    23 QEGKFSGPLKPMTFSIYEGQEPSQIIFQF---KANPPAVTFELTGETDNIFVIEREGLLYYNRAL 84
            :|.....|..|....|: |...::|....   |..|   .|:|.|:.           |...:.|
  Fly    50 RESFIGQPTTPPELPIF-GDPDTEIALNLVFPKGQP---IFQLNGKK-----------LQLLQPL 99

Human    85 DRE--------------TRSTHNLQVAALDANGIIVEGPVPITIKVKDINDNRPTFLQSKYEGSV 135
            ||:              ||||...:.             :||.::|.|||||.|.|:.:.||.:|
  Fly   100 DRDEENLSHIVFQVSCTTRSTGKKRT-------------IPIIVRVSDINDNAPRFMNTPYEVTV 151

Human   136 RQNSRPGKPFLYVNATDLDDPATPNGQLYYQIVIQLPMINNVMYFQINN-KTGAISLTREG---- 195
            .: |.|....::.|...||..|..||.:.|.|....|...||..:..:. .|.|||...:|    
  Fly   152 PE-STPVGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTV 215

Human   196 SQELNPAKNPSYNLVISVKDMGGQSENSFSDTTSVDIIVTEN----------------------- 237
            ::.|:..|..:|.|.|...|....:.:..|.||::.:.:.::                       
  Fly   216 AKTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGACINPE 280

Human   238 -------------IWKAPKPVEMVENSTDPHPIKITQVRWNDPG--AQYSLVDKE---------- 277
                         :...|:.::.|:..|...||:.:... ..||  |.|..:|:.          
  Fly   281 YSASVPAGSLLGVLTVLPERIQAVDLDTINSPIRYSFAS-GMPGNYADYFQIDESTGVLKQTKAV 344

Human   278 ---------------------------KLPRFPFSID----------QEGDIYVTQPL------- 298
                                       ||..|...:|          .||.:....|:       
  Fly   345 DTSTAKKYDIIVKAEEVSPGPQRFTTAKLEIFVKPVDANPPVISSSQAEGYVDENSPIGTRVLDA 409

Human   299 ----------DREEKDAVSKRE--------EFHRRQDKVL------------CPSTYVFYAVAKD 333
                      |.:..|:..|.:        .|:...|.:|            .|..:.|..||::
  Fly   410 HGNPISFMTTDADLSDSDPKPDYIYELTTPSFNVTGDGILVVNEENLDRDPPAPGRFKFQVVARE 474

Human   334 EYGKPLSYPLEIHVKVKDINDNPP----TCPSPVTVFEVQENERLGNSIGTLTAHDRDEENTANS 394
            ......|.||.:.|.::|:|||.|    ..|..:|..: |...||   :..:||.|.||  ..|:
  Fly   475 PRTNAASAPLSLTVHLRDVNDNAPKLAMVAPISITAGD-QSESRL---VTQVTATDNDE--GPNA 533

Human   395 FLNYRIVEQTPKLPMDGL--FLIQTYAGMLQLAKQSLKKQDTPQYNLTIEVSD-KDFKTLCFVQI 456
            .:.|.|..    :..:|:  |.|....|.::...:.|..:   ||::|::.:| ....:...|::
  Fly   534 VVTYSIYH----VSNNGIQKFTINATTGEIRTQGRLLAGE---QYSITVQATDIGGLSSQAIVEV 591

Human   457 NVI-DINDQIPIFEKSDYGNLTLAEDTNIGSTILTIQATDADEPFTGSSKILYHIIKGDSEGRLG 520
            :|. ..|.:.|.|:|..| .:.::|...|.||:..:.|.|.:     :..::|.||.|:...:..
  Fly   592 SVTPGPNTKPPRFQKPIY-EVQVSEGAEINSTVTVVHAEDPE-----NDAVVYSIISGNDLRQFA 650

Human   521 VDTDPHTNTGYVIIKKPLDFETAAVSNIVFKAENPEPLVFGVKYNASSFAKFTLIVTDVNEA-PQ 584
            |..:    :|.:|:.:.||.|:.....::.|||:...|        ||.|...:.|||:|:. |:
  Fly   651 VGQE----SGVIIVIRKLDRESLTRYQLILKAEDTGGL--------SSSATVNIKVTDINDKNPE 703

Human   585 FS----QHVFQAKVSEDVAIGTKVGNVTAKD-PEGL--DISYSLRGDTRGWLKIDHVTGEIFSVA 642
            |.    .:|||.   |:......||.|.|.| .||:  :|:||:..|..  ..|:..:|||.:..
  Fly   704 FEASTLPYVFQV---EEGKAQASVGVVHATDADEGINAEITYSIPTDIP--FTINATSGEILTAK 763

Human   643 PLDREAGSPYRVQVVATEVGGSSLSSVSEFHLILMDVNDNPPRLAKDYTGLFFCHPLSAPGSLI- 706
            .||.|..:.|:..|.|.:....:....:...::::|:.|..|:.:.....:..  |.:....|: 
  Fly   764 ELDYEQLNEYKFVVTAKDGAPDARLGTASVTVMVLDLPDEVPKFSDARIDVHI--PENEENFLVA 826

Human   707 -FEATDDDQHLFRGPHFTFSLGSGSLQNDWEVSKINGTHARLSTRHTEFEEREYVVLIRINDGGR 770
             .:|.|.|..    |..|:.|..|:.:. ::||:.:|....:.....|.:::..:.:..|.:.|.
  Fly   827 TVQAFDPDSM----PEITYVLRKGNAEL-FKVSEKSGEVRTIKGLDYESQKQHQLTIGTIENDGN 886

Human   771 PPLEGIV---------SLPVTFCSCVEGSCFRPAGHQTGIP---TVG--MAVGILLTTL------ 815
            .|.:.|:         .||..|.:               :|   ||.  ..:|.::.||      
  Fly   887 GPGDTILLVVDVEDRNDLPPRFIT---------------VPDPVTVNDDQGIGTIIATLPAIDGD 936

Human   816 ----------LVIGIILAVVFIRIKKDKG----------KDNVE-----------SAQASEVKPL 849
                      .::|...|..:.::..|.|          :::.|           ..|.|.|.||
  Fly   937 GTSPGNVVRYEIVGRGKAPKYFQVDPDTGAVRIRDELRKEEDTEYQVDIRAYDLGEPQLSSVAPL 1001

Human   850 R 850
            |
  Fly  1002 R 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDH17NP_001400880.1 Cadherin_repeat 33..122 CDD:206637 23/105 (22%)
Cadherin_repeat 131..235 CDD:206637 30/108 (28%)
CA 271..357 CDD:214520 27/169 (16%)
Cadherin_repeat 365..463 CDD:206637 22/101 (22%)
Cadherin_repeat 475..581 CDD:206637 26/105 (25%)
Cadherin_repeat 589..682 CDD:206637 26/95 (27%)
CA_like 700..784 CDD:481204 18/94 (19%)
Cad99CNP_733314.1 CA_like 68..140 CDD:481204 22/98 (22%)
Cadherin_repeat 146..259 CDD:206637 30/113 (27%)
Cadherin_repeat 280..383 CDD:206637 14/103 (14%)
Cadherin_repeat 393..496 CDD:206637 19/102 (19%)
Cadherin_repeat 518..594 CDD:206637 19/87 (22%)
Cadherin_repeat 608..699 CDD:206637 27/108 (25%)
Cadherin_repeat 710..802 CDD:206637 26/96 (27%)
Cadherin_repeat 814..903 CDD:206637 17/95 (18%)
Cadherin_repeat 915..1005 CDD:206637 16/88 (18%)
Cadherin_repeat 1041..1144 CDD:206637
Cadherin_repeat 1159..1264 CDD:206637
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.